RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 BRD9Q9H8M2 597 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 MRPL47Q9HD33 250 aaKnown RBP11.77□□□□□ -0.53
HTT-213ENST00000513806 IGSF9Q9P2J2 1179 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 PCSK1NQ9UHG2 260 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 ZMYM5Q9UJ78 669 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 TLR6Q9Y2C9 796 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 PAXBP1Q9Y5B6 917 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 A0A0C4DFX4 3053 aa11.77□□□□□ -0.53
HTT-213ENST00000513806 NCOR1O75376 2440 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 E2F8A0AVK6 867 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 KCNU1A8MYU2 1149 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 ARNTLO00327 626 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 PAGE1O75459 146 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 ENDOD1O94919 500 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 TCF3P15923 654 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 GJC1P36383 396 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 HARS2P49590 506 aaKnown RBP11.76□□□□□ -0.53
HTT-213ENST00000513806 CXCR3P49682 368 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 NUMBP49757 651 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 VAV2P52735 878 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 TAS2R40P59535 323 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 FCHO2Q0JRZ9 810 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 TDGQ13569 410 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 CA9Q16790 459 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 FAM133BQ5BKY9 247 aaKnown RBP11.76□□□□□ -0.53
HTT-213ENST00000513806 LY6G5CQ5SRR4 150 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 PIK3R6Q5UE93 754 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 CC2D1AQ6P1N0 951 aaPredicted RBP11.76□□□□□ -0.53
HTT-213ENST00000513806 HTR3DQ70Z44 454 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 ARCQ7LC44 396 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 CIR1Q86X95 450 aaPredicted RBP11.76□□□□□ -0.53
HTT-213ENST00000513806 TMEM25Q86YD3 366 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 PYROXD2Q8N2H3 581 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 DEPDC1BQ8WUY9 529 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 RFFLQ8WZ73 363 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 CENPIQ92674 756 aaPredicted RBP11.76□□□□□ -0.53
HTT-213ENST00000513806 FAM83CQ9BQN1 747 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 CNPY3Q9BT09 278 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 SIK2Q9H0K1 926 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 HEBP1Q9NRV9 189 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 OBP2AQ9NY56 170 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 PLK2Q9NYY3 685 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 LSM7Q9UK45 103 aaKnown RBP11.76□□□□□ -0.53
HTT-213ENST00000513806 CA14Q9ULX7 337 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 PYCARDQ9ULZ3 195 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 NUP205Q92621 2012 aa11.76□□□□□ -0.53
HTT-213ENST00000513806 MACROD2A1Z1Q3 448 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 ANTXRLA6NF34 631 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 FAM72CH0Y354 149 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 CHADO15335 359 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 ACSL4O60488 711 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 LRCH4O75427 683 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 IPO7O95373 1038 aaKnown RBP11.75□□□□□ -0.53
HTT-213ENST00000513806 MOCS3O95396 460 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 APOEP02649 317 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 CYP17A1P05093 508 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 TNNT1P13805 278 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 IL1R2P27930 398 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 MIPP30301 263 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 CCR1P32246 355 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 SSR1P43307 286 aaKnown RBP11.75□□□□□ -0.53
HTT-213ENST00000513806 SMTNL2Q2TAL5 461 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 MS4A13Q5J8X5 152 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 C10orf76Q5T2E6 689 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 FAM72AQ5TYM5 149 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 FAM72DQ6L9T8 149 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 RHBDF2Q6PJF5 856 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 CYP4V2Q6ZWL3 525 aaPredicted RBP11.75□□□□□ -0.53
HTT-213ENST00000513806 STRADAQ7RTN6 431 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 C12orf40Q86WS4 652 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 CHSY1Q86X52 802 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 FAM72BQ86X60 149 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 DDX42Q86XP3 938 aaKnown RBP eCLIP11.75□□□□□ -0.53
HTT-213ENST00000513806 CFAP52Q8N1V2 620 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 NAT16Q8N8M0 369 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 E2F7Q96AV8 911 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 CHFRQ96EP1 664 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 PGAP3Q96FM1 320 aaPredicted RBP11.75□□□□□ -0.53
HTT-213ENST00000513806 PRICKLE1Q96MT3 831 aaPredicted RBP11.75□□□□□ -0.53
HTT-213ENST00000513806 ZWILCHQ9H900 591 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 KLHL11Q9NVR0 708 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 ARHGEF38Q9NXL2 777 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 RRN3Q9NYV6 651 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 UVRAGQ9P2Y5 699 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 INTUQ9ULD6 942 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 CLEC4EQ9ULY5 219 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 DUSP12Q9UNI6 340 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 SORCS3Q9UPU3 1222 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 HS3ST4Q9Y661 456 aa11.75□□□□□ -0.53
HTT-213ENST00000513806 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
HTT-213ENST00000513806 MYO18AQ92614 2054 aaKnown RBP11.74□□□□□ -0.53
HTT-213ENST00000513806 MYO1FO00160 1098 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 TRIM24O15164 1050 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 PJA2O43164 708 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 BUB1BO60566 1050 aaPredicted RBP11.74□□□□□ -0.53
HTT-213ENST00000513806 PROSCO94903 275 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 SLC34A2O95436 690 aa11.74□□□□□ -0.53
HTT-213ENST00000513806 TACR2P21452 398 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms