RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 KIAA0895LQ68EN5 471 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 KLHDC10Q6PID8 442 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 KDM7AQ6ZMT4 941 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 ACOT1Q86TX2 421 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 RDH13Q8NBN7 331 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 SLC2A14Q8TDB8 520 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 CYB5D2Q8WUJ1 264 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 CCDC127Q96BQ5 260 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 EPSTI1Q96J88 318 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 XYLT2Q9H1B5 865 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 NMUR1Q9HB89 426 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 SGK2Q9HBY8 427 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 AASDHPPTQ9NRN7 309 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLDND1-227ENST00000513452 SCML2Q9UQR0 700 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 KIF3AQ9Y496 699 aa11.02□□□□□ -0.65
CLDND1-227ENST00000513452 YKT6O15498 198 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 DNTTP04053 509 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 CHKAP35790 457 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 INSM1Q01101 510 aaPredicted RBP11.01□□□□□ -0.65
CLDND1-227ENST00000513452 ILKQ13418 452 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 SNRNP35Q16560 246 aaKnown RBP11.01□□□□□ -0.65
CLDND1-227ENST00000513452 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 DCBLD1Q8N8Z6 715 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 GANCQ8TET4 914 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 TTC9Q92623 222 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 SYAP1Q96A49 352 aaPredicted RBP11.01□□□□□ -0.65
CLDND1-227ENST00000513452 SKA1Q96BD8 255 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 TRIM4Q9C037 500 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 KIAA1586Q9HCI6 787 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 CSNK1G1Q9HCP0 422 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 GDF3Q9NR23 364 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 FAM49BQ9NUQ9 324 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 RASAL2Q9UJF2 1139 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 NAGPAQ9UK23 515 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 ZNF510Q9Y2H8 683 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 PCDHB1Q9Y5F3 818 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 PLXNA2O75051 1894 aa11.01□□□□□ -0.65
CLDND1-227ENST00000513452 MYH10P35580 1976 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 A0A1W2PPC4 97 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 FRMD3A2A2Y4 597 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 H3BQV1 296 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 TIMM44O43615 452 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 PHACTR2O75167 634 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 STAU1O95793 577 aaKnown RBP11□□□□□ -0.65
CLDND1-227ENST00000513452 BMP15O95972 392 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 MPOP05164 745 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 FAM200BP0CF97 657 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 CKMT2P17540 419 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 ADORA2BP29275 332 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 ATICP31939 592 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 ARRB1P49407 418 aaPredicted RBP11□□□□□ -0.65
CLDND1-227ENST00000513452 CSRP3P50461 194 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 ZBTB16Q05516 673 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 CYP24A1Q07973 514 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 PSMD6Q15008 389 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 ZNF776Q68DI1 518 aaPredicted RBP11□□□□□ -0.65
CLDND1-227ENST00000513452 DHX40Q8IX18 779 aaKnown RBP11□□□□□ -0.65
CLDND1-227ENST00000513452 DDI1Q8WTU0 396 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 KCNE4Q8WWG9 221 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 RFFLQ8WZ73 363 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 MED8Q96G25 268 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 HIC2Q96JB3 615 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11□□□□□ -0.65
CLDND1-227ENST00000513452 SLC2A11Q9BYW1 496 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 SDCBP2Q9H190 292 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 TMEM245Q9H330 911 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 FBRSQ9HAH7 460 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 PRSS16Q9NQE7 514 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 PANK4Q9NVE7 773 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 CCDC39Q9UFE4 941 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 HMGXB4Q9UGU5 601 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 ADAMTS1Q9UHI8 967 aa11□□□□□ -0.65
CLDND1-227ENST00000513452 AGO1Q9UL18 857 aaKnown RBP11□□□□□ -0.65
CLDND1-227ENST00000513452 HHLA1C9JL84 531 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 KLK10O43240 276 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 C7P10643 843 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 CD38P28907 300 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 CYP2J2P51589 502 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 EFEMP1Q12805 493 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 BNIP3Q12983 259 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 BIRC3Q13489 604 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 ZNF699Q32M78 642 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 ZNF667Q5HYK9 610 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 SFMBT2Q5VUG0 894 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 RRAGBQ5VZM2 374 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 NCEH1Q6PIU2 408 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 SCD5Q86SK9 330 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 TADA2BQ86TJ2 420 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 DENND1CQ8IV53 801 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 CACTIN-AS1Q8N1I8 211 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 C12orf29Q8N999 325 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 ZNF516Q92618 1163 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 HPS3Q969F9 1004 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 ZNF578Q96N58 590 aaPredicted RBP10.99□□□□□ -0.65
CLDND1-227ENST00000513452 DCLK3Q9C098 648 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 EBF2Q9HAK2 575 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 SERGEFQ9UGK8 458 aa10.99□□□□□ -0.65
CLDND1-227ENST00000513452 PLA2G4CQ9UP65 541 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms