RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 TKTL2Q9H0I9 626 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 ADAM7Q9H2U9 754 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.27□□□□□ -0.611e-6■■□□□ 13.8
PFDN1-204ENST00000512707 GREB1Q4ZG55 1949 aa11.27□□□□□ -0.61
PFDN1-204ENST00000512707 BDP1A6H8Y1 2624 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 H3BRJ5 948 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 DDX3YO15523 660 aaKnown RBP11.26□□□□□ -0.61
PFDN1-204ENST00000512707 OLFM2O95897 454 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 MOCS2O96007 188 aaPredicted RBP11.26□□□□□ -0.61
PFDN1-204ENST00000512707 HMBSP08397 361 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 RARAP10276 462 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 HTR7P34969 479 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 PAFAH1B1P43034 410 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 CDH6P55285 790 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 SLC7A9P82251 487 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 SCAPQ12770 1279 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 ADGRE1Q14246 886 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 SKIV2LQ15477 1246 aaKnown RBP11.26□□□□□ -0.61
PFDN1-204ENST00000512707 TEAD2Q15562 447 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 CTC1Q2NKJ3 1217 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 SMTNL2Q2TAL5 461 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 ZC3H12AQ5D1E8 599 aaKnown RBP11.26□□□□□ -0.61
PFDN1-204ENST00000512707 PRSS36Q5K4E3 855 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 VSIG1Q86XK7 387 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 ARFGAP1Q8N6T3 406 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 KRT35Q92764 455 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 NECTIN4Q96NY8 510 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 HAPLN3Q96S86 360 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 PSMB7Q99436 277 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 EPAS1Q99814 870 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 SNRNP25Q9BV90 132 aaKnown RBP11.26□□□□□ -0.61
PFDN1-204ENST00000512707 APOL5Q9BWW9 433 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 CALN1Q9BXU9 219 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 MAK16Q9BXY0 300 aaKnown RBP11.26□□□□□ -0.61
PFDN1-204ENST00000512707 DHX35Q9H5Z1 703 aaKnown RBP11.26□□□□□ -0.61
PFDN1-204ENST00000512707 KIF9Q9HAQ2 790 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 WDR6Q9NNW5 1121 aaKnown RBP11.26□□□□□ -0.61
PFDN1-204ENST00000512707 ARHGEF38Q9NXL2 777 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 STIM2Q9P246 746 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 RNF14Q9UBS8 474 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 FZD10Q9ULW2 581 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 ZNF510Q9Y2H8 683 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 SH3BP1Q9Y3L3 701 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 CPQQ9Y646 472 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 ATG2AQ2TAZ0 1938 aa11.26□□□□□ -0.61
PFDN1-204ENST00000512707 ZNF638Q14966 1978 aaKnown RBP11.25□□□□□ -0.61
PFDN1-204ENST00000512707 KCNU1A8MYU2 1149 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 DAPK3O43293 454 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 CEP104O60308 925 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 LATS1O95835 1130 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 IGLV3-27P01718 113 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 IRF1P10914 325 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 TCF4P15884 667 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 GJA1P17302 382 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 COL9A1P20849 921 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 IL1R2P27930 398 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 CXCR5P32302 372 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 CCR2P41597 374 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 PEX5P50542 639 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 ATXN1P54253 815 aaKnown RBP11.25□□□□□ -0.61
PFDN1-204ENST00000512707 NTHL1P78549 312 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 CKAP4Q07065 602 aaKnown RBP11.25□□□□□ -0.61
PFDN1-204ENST00000512707 DPYSL2Q16555 572 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 SLC5A9Q2M3M2 681 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 TFDP3Q5H9I0 405 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 PPP6R3Q5H9R7 873 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-204ENST00000512707 KCNT1Q5JUK3 1230 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 SYCE2Q6PIF2 218 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 LRRC31Q6UY01 552 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 CPNE8Q86YQ8 564 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 CMTM8Q8IZV2 173 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 CCDC185Q8N715 623 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-204ENST00000512707 MAIP1Q8WWC4 291 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 ATXN2LQ8WWM7 1075 aaKnown RBP11.25□□□□□ -0.61
PFDN1-204ENST00000512707 ING5Q8WYH8 240 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 ALG3Q92685 438 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 TCEAL4Q96EI5 215 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 SLC39A13Q96H72 371 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 FCRL2Q96LA5 508 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-204ENST00000512707 PEBP4Q96S96 227 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 KLF16Q9BXK1 252 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-204ENST00000512707 OSBPL2Q9H1P3 480 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 PRDM16Q9HAZ2 1276 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 KLHL11Q9NVR0 708 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 SMPD4Q9NXE4 827 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 DONSONQ9NYP3 566 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 GDE1Q9NZC3 331 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 RCOR3Q9P2K3 495 aaPredicted RBP11.25□□□□□ -0.61
PFDN1-204ENST00000512707 CD207Q9UJ71 328 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 ARHGAP26Q9UNA1 814 aa11.25□□□□□ -0.61
PFDN1-204ENST00000512707 GOLGA6L10A0A0M3HER8 536 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 TYW5A2RUC4 315 aaKnown RBP11.24□□□□□ -0.61
PFDN1-204ENST00000512707 ZNF487B1APH4 448 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 PI4K2BG5E9Z4 385 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 PGRMC1O00264 195 aaKnown RBP11.24□□□□□ -0.61
PFDN1-204ENST00000512707 TBX10O75333 385 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 PAGE1O75459 146 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 TJP3O95049 919 aa11.24□□□□□ -0.61
PFDN1-204ENST00000512707 ZFXP17010 805 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms