RNA–Protein interactions for RNA: ENST00000512340.5

NR1I3-231, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 891 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-231	ENST00000512340	TIMM44	O43615	452 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	NRDC	O43847	1150 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	RTN2	O75298	545 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	RNF8	O76064	485 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	MOCS3	O95396	460 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	ERBB2	P04626	1255 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	CYP17A1	P05093	508 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	PDGFRA	P16234	1089 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	GJA4	P35212	333 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	GRIA2	P42262	883 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	TNFRSF4	P43489	277 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	DEUP1	Q05D60	604 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	NME3	Q13232	169 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	PON2	Q15165	354 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	OLFML1	Q6UWY5	402 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	TPGS1	Q6ZTW0	290 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	IRF2BP2	Q7Z5L9	587 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	MTERF4	Q7Z6M4	381 aa	Known RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	XYLT1	Q86Y38	959 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	VSTM4	Q8IW00	320 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	TXLNB	Q8N3L3	684 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	SPEM1	Q8N4L4	309 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	WDTC1	Q8N5D0	677 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	DTWD2	Q8NBA8	298 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	HJURP	Q8NCD3	748 aa	Predicted RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	C3orf20	Q8ND61	904 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	TTC8	Q8TAM2	541 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	CLEC4C	Q8WTT0	213 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	SLC20A1	Q8WUM9	679 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	BAP1	Q92560	729 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	NDRG1	Q92597	394 aa	Known RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	CLDN23	Q96B33	292 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	ZFR	Q96KR1	1074 aa	Known RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	CCDC42	Q96M95	316 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	LRRC3B	Q96PB8	259 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	C11orf70	Q9BRQ4	267 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	FAM126A	Q9BYI3	521 aa	Predicted RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	LINC00597	Q9H2U6	94 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	HAUS4	Q9H6D7	363 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	YY1AP1	Q9H869	796 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	PRDM16	Q9HAZ2	1276 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	HPS4	Q9NQG7	708 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	ARHGEF4	Q9NR80	690 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	DNAJC17	Q9NVM6	304 aa	Known RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	SPATA6	Q9NWH7	488 aa	Predicted RBP	7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	DONSON	Q9NYP3	566 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	MARK1	Q9P0L2	795 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	CYTH4	Q9UIA0	394 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	SLC8A2	Q9UPR5	921 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	NAALADL1	Q9UQQ1	740 aa		7.76	□□□□□ -1.17
NR1I3-231	ENST00000512340	SYNJ2BP-COX16	A0A087WUM0	186 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	SIGLEC16	A6NMB1	481 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	GALR2	O43603	387 aa	Predicted RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	AKR1B10	O60218	316 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	CACNG3	O60359	315 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	ACSL4	O60488	711 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	GRAP2	O75791	330 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	ALDH1A2	O94788	518 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	MOCS2	O96007	188 aa	Predicted RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	FTL	P02792	175 aa	Predicted RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	UNG	P13051	313 aa	Predicted RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	TYR	P14679	529 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	CASP14	P31944	242 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	RDX	P35241	583 aa	Known RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	PBX1	P40424	430 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	CXCL12	P48061	93 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	DGKG	P49619	791 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	SULT1E1	P49888	294 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	GALK1	P51570	392 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	GSC	P56915	257 aa	Predicted RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	MRPS21	P82921	87 aa	Known RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	TCF15	Q12870	199 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	EIF4H	Q15056	248 aa	Known RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	TMEM196	Q5HYL7	178 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	RHBDF2	Q6PJF5	856 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	MAMSTR	Q6ZN01	415 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340		Q6ZNB5	142 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	BHLHA9	Q7RTU4	235 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	TAC4	Q86UU9	113 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	CHSY1	Q86X52	802 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	TMEM25	Q86YD3	366 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	CCDC105	Q8IYK2	499 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	SLC30A5	Q8TAD4	765 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	WFIKKN2	Q8TEU8	576 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	ATOH1	Q92858	354 aa	Predicted RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	PGAP3	Q96FM1	320 aa	Predicted RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	MRFAP1L1	Q96HT8	127 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	FOXQ1	Q9C009	403 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	TTYH3	Q9C0H2	523 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	CHRD	Q9H2X0	955 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	RETREG1	Q9H6L5	497 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	COX16	Q9P0S2	106 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	STOML2	Q9UJZ1	356 aa		7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	AGO1	Q9UL18	857 aa	Known RBP	7.75	□□□□□ -1.17
NR1I3-231	ENST00000512340	TICRR	Q7Z2Z1	1910 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	SSU72P8	A0A1W2PR75	194 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	GOLGA6L3	A6NEY3	463 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	TMCO5B	A8MYB1	307 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	KCNU1	A8MYU2	1149 aa		7.74	□□□□□ -1.17
NR1I3-231	ENST00000512340	MSI1	O43347	362 aa	Known RBP	7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms