RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ADGRF1Q5T601 910 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 OR6B2Q6IFH4 312 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 NOP9Q86U38 636 aaKnown RBP17.16■□□□□ 0.34
DDX41-213ENST00000512027 CHPFQ8IZ52 775 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 ABCA7Q8IZY2 2146 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 FRMD1Q8N878 549 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 WFDC5Q8TCV5 224 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 HMGB4Q8WW32 186 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 RLN3Q8WXF3 142 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 SERPINB11Q96P15 392 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 POPDC2Q9HBU9 364 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 NLRC4Q9NPP4 1024 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 LIMA1Q9UHB6 759 aaKnown RBP17.16■□□□□ 0.34
DDX41-213ENST00000512027 XPO7Q9UIA9 1087 aaKnown RBP17.16■□□□□ 0.34
DDX41-213ENST00000512027 STOML2Q9UJZ1 356 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 USP18Q9UMW8 372 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 SIK3Q9Y2K2 1263 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 STARD13Q9Y3M8 1113 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 THADAQ6YHU6 1953 aa17.16■□□□□ 0.34
DDX41-213ENST00000512027 SYNJ2BP-COX16A0A087WUM0 186 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 ACSL4O60488 711 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 ZNF18P17022 549 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 BCKDHBP21953 392 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 TGM1P22735 817 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 NTSR1P30989 418 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 POLR2FP61218 127 aaKnown RBP17.15■□□□□ 0.34
DDX41-213ENST00000512027 YWHAZP63104 245 aaKnown RBP17.15■□□□□ 0.34
DDX41-213ENST00000512027 SYCP1Q15431 976 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 HSF5Q4G112 596 aaPredicted RBP17.15■□□□□ 0.34
DDX41-213ENST00000512027 MPPE1Q53F39 396 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 C2CD6Q53TS8 623 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 FKBP15Q5T1M5 1219 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 NUGGCQ68CJ6 796 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 TMEM215Q68D42 235 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 KIAA1211LQ6NV74 962 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 OLFML1Q6UWY5 402 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 NUDT18Q6ZVK8 323 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 APTXQ7Z2E3 356 aaKnown RBP17.15■□□□□ 0.34
DDX41-213ENST00000512027 DEFB106AQ8N104 65 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 SLC20A1Q8WUM9 679 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 SORCS1Q8WY21 1168 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 DDX1Q92499 740 aaKnown RBP17.15■□□□□ 0.34
DDX41-213ENST00000512027 SLC39A13Q96H72 371 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 PRICKLE1Q96MT3 831 aaPredicted RBP17.15■□□□□ 0.34
DDX41-213ENST00000512027 STK33Q9BYT3 514 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 LHX5Q9H2C1 402 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 PDCL3Q9H2J4 239 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 POLMQ9NP87 494 aaPredicted RBP17.15■□□□□ 0.34
DDX41-213ENST00000512027 COX16Q9P0S2 106 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 BCCIPQ9P287 314 aaKnown RBP eCLIP17.15■□□□□ 0.34
DDX41-213ENST00000512027 TLR6Q9Y2C9 796 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 SLC27A6Q9Y2P4 619 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 DCHS1Q96JQ0 3298 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 PLXND1Q9Y4D7 1925 aa17.15■□□□□ 0.34
DDX41-213ENST00000512027 A0A1W2PQF6 199 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 IRAK2O43187 625 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 TBL1XO60907 577 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 GFPT2O94808 682 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 LATS1O95835 1130 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 TRUB2O95900 331 aaKnown RBP17.14■□□□□ 0.33
DDX41-213ENST00000512027 RETP07949 1114 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 TPM2P07951 284 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 MMEP08473 750 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 RING1Q06587 406 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 PLK5Q496M5 336 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 DCAF6Q58WW2 860 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 ZC3H12AQ5D1E8 599 aaKnown RBP17.14■□□□□ 0.33
DDX41-213ENST00000512027 PIK3R6Q5UE93 754 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 ANKS1BQ7Z6G8 1248 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 UNC45BQ8IWX7 931 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 PGBD3Q8N328 593 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 EPS8L1Q8TE68 723 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 TMA16Q96EY4 203 aaKnown RBP17.14■□□□□ 0.33
DDX41-213ENST00000512027 NUCKS1Q9H1E3 243 aaKnown RBP17.14■□□□□ 0.33
DDX41-213ENST00000512027 DUSP15Q9H1R2 295 aaPredicted RBP17.14■□□□□ 0.33
DDX41-213ENST00000512027 SLC6A17Q9H1V8 727 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 SMOC1Q9H4F8 434 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 SYNCQ9H7C4 482 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 STIM2Q9P246 746 aa17.14■□□□□ 0.33
DDX41-213ENST00000512027 DNAH14Q0VDD8 3507 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 LGALS16A8MUM7 142 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 ALDH1A2O94788 518 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 IGLV3-25P01717 112 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 GABRG2P18507 467 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 CDK11BP21127 795 aaKnown RBP17.13■□□□□ 0.33
DDX41-213ENST00000512027 HLA-FP30511 346 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 GBP1P32455 592 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 SLC11A2P49281 568 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 BPIFB4P59827 614 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 TRMT11Q7Z4G4 463 aaKnown RBP17.13■□□□□ 0.33
DDX41-213ENST00000512027 IPO4Q8TEX9 1081 aaKnown RBP17.13■□□□□ 0.33
DDX41-213ENST00000512027 PCMTD1Q96MG8 357 aaPredicted RBP17.13■□□□□ 0.33
DDX41-213ENST00000512027 NOX5Q96PH1 765 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 SLC2A13Q96QE2 648 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 GABRG3Q99928 467 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 CIPCQ9C0C6 399 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 ARRDC1-AS1Q9H2J1 176 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 FAM204AQ9H8W3 233 aa17.13■□□□□ 0.33
DDX41-213ENST00000512027 CD248Q9HCU0 757 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms