RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 E2F1Q01094 437 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 GRIN1Q05586 938 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 PDE4CQ08493 712 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 LY6DQ14210 128 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 TTC31Q49AM3 519 aaPredicted RBP12.15□□□□□ -0.46
RNF4-216ENST00000511859 C10orf120Q5SQS8 335 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 PRAMEF14Q5SWL7 426 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 FUKQ8N0W3 1084 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 ZMIZ2Q8NF64 920 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 TTC9Q92623 222 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 GOLGA1Q92805 767 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 SYAP1Q96A49 352 aaPredicted RBP12.15□□□□□ -0.46
RNF4-216ENST00000511859 HNRNPABQ99729 332 aaKnown RBP12.15□□□□□ -0.46
RNF4-216ENST00000511859 SMOQ99835 787 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 TMEM245Q9H330 911 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
RNF4-216ENST00000511859 OSER1Q9NX31 292 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 NXF1Q9UBU9 619 aaKnown RBP12.15□□□□□ -0.46
RNF4-216ENST00000511859 CCDC39Q9UFE4 941 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 ADAMTS1Q9UHI8 967 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 SCML1Q9UN30 329 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 NCKAP1Q9Y2A7 1128 aa12.15□□□□□ -0.46
RNF4-216ENST00000511859 BOD1L1Q8NFC6 3051 aa12.15□□□□□ -0.47
RNF4-216ENST00000511859 PLXNA2O75051 1894 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 BEST1O76090 585 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 KLKB1P03952 638 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 IGHV4-34P06331 123 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 DLATP10515 647 aaKnown RBP12.14□□□□□ -0.47
RNF4-216ENST00000511859 MAP3K7CLP57077 242 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 MYL6P60660 151 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 RPS14P62263 151 aaKnown RBP12.14□□□□□ -0.47
RNF4-216ENST00000511859 SFSWAPQ12872 951 aaKnown RBP12.14□□□□□ -0.47
RNF4-216ENST00000511859 RABEP1Q15276 862 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 SHBQ15464 509 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 TMEM215Q68D42 235 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 KIAA0895LQ68EN5 471 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 STXBP4Q6ZWJ1 553 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 USP30Q70CQ3 517 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 DHX40Q8IX18 779 aaKnown RBP12.14□□□□□ -0.47
RNF4-216ENST00000511859 SORCS1Q8WY21 1168 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 HIC2Q96JB3 615 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 CDK5RAP1Q96SZ6 601 aaKnown RBP12.14□□□□□ -0.47
RNF4-216ENST00000511859 DPH1Q9BZG8 443 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 VRTNQ9H8Y1 702 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 CPNE5Q9HCH3 593 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 GDF3Q9NR23 364 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 KRT82Q9NSB4 513 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 HSPBP1Q9NZL4 362 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 UNC79Q9P2D8 2635 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 PCDHA5Q9Y5H7 936 aa12.14□□□□□ -0.47
RNF4-216ENST00000511859 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
RNF4-216ENST00000511859 FRMD3A2A2Y4 597 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 PYCARD-AS1I3L0S3 204 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 NTRK1P04629 796 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 RALAP11233 206 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 IDEP14735 1019 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 ACP1P24666 158 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 CD38P28907 300 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 RXRGP48443 463 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 ERVPABLB-1P60509 514 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 INSM1Q01101 510 aaPredicted RBP12.13□□□□□ -0.47
RNF4-216ENST00000511859 VAC14Q08AM6 782 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 SNRNP35Q16560 246 aaKnown RBP12.13□□□□□ -0.47
RNF4-216ENST00000511859 BMT2Q1RMZ1 405 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 CRYBG2Q8N1P7 616 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 CPXM2Q8N436 756 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 OXR1Q8N573 874 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 RDH13Q8NBN7 331 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 NAF1Q96HR8 494 aaKnown RBP12.13□□□□□ -0.47
RNF4-216ENST00000511859 CGRRF1Q99675 332 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 XYLT2Q9H1B5 865 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 ERVMER34-1Q9H9K5 563 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 NMUR1Q9HB89 426 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 PRSS16Q9NQE7 514 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 PANK4Q9NVE7 773 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 SUN2Q9UH99 717 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 IL17BQ9UHF5 180 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 NUDT5Q9UKK9 219 aa12.13□□□□□ -0.47
RNF4-216ENST00000511859 BSNQ9UPA5 3926 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 A0A1W2PQH9 124 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 H3BQV1 296 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 MDM4O15151 490 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 CYP26A1O43174 497 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 DXOO77932 396 aaKnown RBP12.12□□□□□ -0.47
RNF4-216ENST00000511859 CD2BP2O95400 341 aaKnown RBP12.12□□□□□ -0.47
RNF4-216ENST00000511859 TRIM21P19474 475 aaKnown RBP12.12□□□□□ -0.47
RNF4-216ENST00000511859 EPHA8P29322 1005 aaPredicted RBP12.12□□□□□ -0.47
RNF4-216ENST00000511859 PSMD6Q15008 389 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 FNDC3BQ53EP0 1204 aaKnown RBP12.12□□□□□ -0.47
RNF4-216ENST00000511859 RRAGBQ5VZM2 374 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 ACOT1Q86TX2 421 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 SLC2A14Q8TDB8 520 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 WFIKKN2Q8TEU8 576 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 DDI1Q8WTU0 396 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 EPSTI1Q96J88 318 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 SLC6A18Q96N87 628 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 FGFBP2Q9BYJ0 223 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 SMYD3Q9H7B4 428 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 PNPLA8Q9NP80 782 aa12.12□□□□□ -0.47
RNF4-216ENST00000511859 CLIC5Q9NZA1 410 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms