RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ITPKBP27987 946 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 GRK5P34947 590 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 PAPOLAP51003 745 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 RBM5P52756 815 aaKnown RBP eCLIP3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 GPC5P78333 572 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 RAE1P78406 368 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 HOXA4Q00056 320 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 AAK1Q2M2I8 961 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 C16orf89Q6UX73 402 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 TRIM72Q6ZMU5 477 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 SYT13Q7L8C5 426 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 SIMC1Q8NDZ2 872 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 NPIPB3Q92617 1050 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 CCDC17Q96LX7 622 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 UROC1Q96N76 676 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 SNX18Q96RF0 628 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 PAAF1Q9BRP4 392 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 THAP7Q9BT49 309 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 DDX23Q9BUQ8 820 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 ADGRE3Q9BY15 652 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 IKZF4Q9H2S9 585 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 ABHD10Q9NUJ1 306 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 KCND3Q9UK17 655 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 GTF2A1LQ9UNN4 478 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 SLC12A4Q9UP95 1085 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 ZBTB1Q9Y2K1 713 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 INSL6Q9Y581 213 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 WNT6Q9Y6F9 365 aa3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 FNDC1Q4ZHG4 1894 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-207ENST00000511409 TTC34A8MYJ7 566 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 TARM1B6A8C7 271 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 B9A039 149 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 E7EVH7 732 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 CLIC1O00299 241 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 ZNF213O14771 459 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM155BO75949 473 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 APEHP13798 732 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 PROZP22891 400 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 PTH2RP49190 550 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 VPS41P49754 854 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 CFHR3Q02985 330 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 PDCLQ13371 301 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 KCNB1Q14721 858 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 CNGA3Q16281 694 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM187BQ17R55 369 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 TRIM60Q495X7 471 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 GALNTL6Q49A17 601 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 CC2D1BQ5T0F9 858 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 TTC22Q5TAA0 569 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 WDR93Q6P2C0 686 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 ACSM6Q6P461 480 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 DCDC5Q6ZRR9 648 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 RINLQ6ZS11 566 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 BCDIN3DQ7Z5W3 292 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 C16orf71Q8IYS4 520 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 PAF1Q8N7H5 531 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 OR52L2PQ8NGH6 319 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 THAP4Q8WY91 577 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 AKAP1Q92667 903 aaKnown RBP eCLIP3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 EDC3Q96F86 508 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 COG8Q96MW5 612 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 PYM1Q9BRP8 204 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 ELOVL1Q9BW60 279 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 CHODLQ9H9P2 273 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 ZNHIT2Q9UHR6 403 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 FEM1BQ9UK73 627 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 FZD4Q9ULV1 537 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 HEMK1Q9Y5R4 338 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 DMRT1Q9Y5R6 373 aa3.86□□□□□ -1.79
TRAPPC11-207ENST00000511409 LOC105369274A0A096LPK9 316 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 LOC102723532A0A0G2JNH3 316 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 GXYLT2A0PJZ3 443 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 RRN3P2A6NIE6 340 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 AGAP5A6NIR3 686 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 SLC38A8A6NNN8 435 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 UBE2Q2LH0YL09 131 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 NKX2-8O15522 239 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 CNTFP26441 200 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 DUSP1P28562 367 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 SLC8A1P32418 973 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 SOX10P56693 466 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 INHBEP58166 350 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 FAM3BP58499 235 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 ACTR2P61160 394 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 RPL15P61313 204 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 WDR5P61964 334 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 RBM6P78332 1123 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 COL10A1Q03692 680 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 SMN1Q16637 294 aaKnown RBP3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 TBRG1Q3YBR2 411 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 CERKLQ49MI3 558 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 TMEM119Q4V9L6 283 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 FBXO47Q5MNV8 452 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 TMEM63BQ5T3F8 832 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 SUMO4Q6EEV6 95 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 DGAT2L7PQ6IED9 249 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 VSTM1Q6UX27 236 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 OR4N4Q8N0Y3 316 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 TMEM57Q8N5G2 664 aa3.85□□□□□ -1.79
TRAPPC11-207ENST00000511409 CEP70Q8NHQ1 597 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms