RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 MAGEB5Q9BZ81 275 aa9.38□□□□□ -0.91
SEC24D-209ENST00000509818 KLC2Q9H0B6 622 aa9.38□□□□□ -0.91
SEC24D-209ENST00000509818 PPCSQ9HAB8 311 aa9.38□□□□□ -0.91
SEC24D-209ENST00000509818 DDIT4Q9NX09 232 aa9.38□□□□□ -0.91
SEC24D-209ENST00000509818 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.38□□□□□ -0.91
SEC24D-209ENST00000509818 PRG3Q9Y2Y8 225 aaPredicted RBP9.38□□□□□ -0.91
SEC24D-209ENST00000509818 SF3B1O75533 1304 aaKnown RBP eCLIP9.38□□□□□ -0.912e-6■■■■■ 46.4
SEC24D-209ENST00000509818 C5orf60A6NFR6 353 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 SRRM3A6NNA2 597 aaPredicted RBP9.37□□□□□ -0.91
SEC24D-209ENST00000509818 E7ESA3 106 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 F8W810 466 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 GOLGA8MH3BSY2 632 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 EEF2KO00418 725 aaKnown RBP9.37□□□□□ -0.91
SEC24D-209ENST00000509818 CREB3O43889 395 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 DGKIO75912 1065 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 PHBP35232 272 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 CXCR3P49682 368 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 IFI35P80217 286 aaPredicted RBP9.37□□□□□ -0.91
SEC24D-209ENST00000509818 GBE1Q04446 702 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 CBLBQ13191 982 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 SLC39A12Q504Y0 691 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 ANKRD22Q5VYY1 191 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 KCNT2Q6UVM3 1135 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 RFX8Q6ZV50 586 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 RIBC1Q8N443 379 aaPredicted RBP9.37□□□□□ -0.91
SEC24D-209ENST00000509818 PYROXD1Q8WU10 500 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 TFB1MQ8WVM0 346 aaKnown RBP9.37□□□□□ -0.91
SEC24D-209ENST00000509818 FUBP3Q96I24 572 aaKnown RBP eCLIP9.37□□□□□ -0.91
SEC24D-209ENST00000509818 CABS1Q96KC9 395 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 WDCPQ9H6R7 721 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 VPS37BQ9H9H4 285 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 WDR6Q9NNW5 1121 aaKnown RBP9.37□□□□□ -0.91
SEC24D-209ENST00000509818 ARHGEF4Q9NR80 690 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 ABCC13Q9NSE7 274 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 DTLQ9NZJ0 730 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 DNAJB4Q9UDY4 337 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 ADAM28Q9UKQ2 775 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 ZMYND8Q9ULU4 1186 aaPredicted RBP9.37□□□□□ -0.91
SEC24D-209ENST00000509818 RAD54BQ9Y620 910 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 FAM169AQ9Y6X4 670 aa9.37□□□□□ -0.91
SEC24D-209ENST00000509818 OR6C75A6NL08 312 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 DCDC2CA8MYV0 355 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 CDH16O75309 829 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 STK10O94804 968 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 ATP2A2P16615 1042 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 PTPRDP23468 1912 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 CYP2C18P33260 490 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 MAGEA6P43360 314 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 YWHAGP61981 247 aaKnown RBP eCLIP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 GUCY1A3Q02108 690 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 DPYSQ14117 519 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 KCNJ11Q14654 390 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 PAFAH1B3Q15102 231 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 PDK1Q15118 436 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 HABP4Q5JVS0 413 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 FNBP1LQ5T0N5 605 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 BTBD8Q5XKL5 378 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 HEATR6Q6AI08 1181 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 TTC19Q6DKK2 380 aaPredicted RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 FOXR1Q6PIV2 292 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 VSTM1Q6UX27 236 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 NECAB2Q7Z6G3 386 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 NPAS4Q8IUM7 802 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 TAB3Q8N5C8 712 aaPredicted RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 GPATCH11Q8N954 259 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 ADAM32Q8TC27 787 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 EDEM1Q92611 657 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 CENPTQ96BT3 561 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 OLFM3Q96PB7 478 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 TMEM175Q9BSA9 504 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 MRPL9Q9BYD2 267 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 RAB6BQ9NRW1 208 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 ETNK2Q9NVF9 386 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 LGALS13Q9UHV8 139 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 SLC12A6Q9UHW9 1150 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 GGA2Q9UJY4 613 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 TCRBV7S3A2A0A539 114 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 TNFRSF10BO14763 440 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 PPP1R12AO14974 1030 aaPredicted RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 PQBP1O60828 265 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 TMEM63AO94886 807 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 SLC34A2O95436 690 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 HNRNPH1P31943 449 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 LSP1P33241 339 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 MAGEA11P43364 429 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 MMP13P45452 471 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 SLC5A3P53794 718 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 TPI1P60174 286 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 ELAVL2Q12926 359 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 NR1H3Q13133 447 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 SEMA3BQ13214 749 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 MRPL58Q14197 206 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 BBS9Q3SYG4 887 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 HP1BP3Q5SSJ5 553 aaPredicted RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 VARS2Q5ST30 1063 aaKnown RBP9.36□□□□□ -0.91
SEC24D-209ENST00000509818 FAM171A1Q5VUB5 890 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 CHRDL2Q6WN34 429 aa9.36□□□□□ -0.91
SEC24D-209ENST00000509818 SLC39A5Q6ZMH5 540 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms