RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SBF1O95248 1867 aa18.51■□□□□ 0.55
CCHCR1-228ENST00000509552 CCDC195A0A1B0GUA6 201 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 C2orf71A6NGG8 1288 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 AKAP5P24588 427 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 SULT1E1P49888 294 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 USP50Q70EL3 339 aaPredicted RBP18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 PSTKQ8IV42 348 aaKnown RBP18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 ARID3BQ8IVW6 561 aaPredicted RBP18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 STKLD1Q8NE28 680 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 ZC3H15Q8WU90 426 aaKnown RBP18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 TNIP3Q96KP6 325 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 OLFM3Q96PB7 478 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 RNF19AQ9NV58 838 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 GDAP2Q9NXN4 497 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 FZD10Q9ULW2 581 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 WDR27A2RRH5 827 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 SDR42E2A6NKP2 422 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 H0Y3Z8 333 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 PDHXO00330 501 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 BPGMP07738 259 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 OCRLQ01968 901 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 CDK18Q07002 472 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 SLC25A52Q3SY17 297 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 FAM131BQ86XD5 332 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 CCNJLQ8IV13 435 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 ARHGAP24Q8N264 748 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 PYROXD2Q8N2H3 581 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 COLGALT1Q8NBJ5 622 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 FAM149B1Q96BN6 582 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 PRR11Q96HE9 360 aaPredicted RBP18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 CDHR5Q9HBB8 845 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 USP3Q9Y6I4 520 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 PLXNB2O15031 1838 aa18.5■□□□□ 0.55
CCHCR1-228ENST00000509552 HMX2A2RU54 273 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 CYB561D2O14569 222 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 LUC7L3O95232 432 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 DARSP14868 501 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 VAV1P15498 845 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 AXLP30530 894 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 TAF6P49848 677 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 STEAP4Q687X5 459 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 LRRC8BQ6P9F7 803 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 DEFB106AQ8N104 65 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 SMC1BQ8NDV3 1235 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 LGMNQ99538 433 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 NMUR2Q9GZQ4 415 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 SMIM28A0A1B0GU29 152 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 XPO1O14980 1071 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 OPHN1O60890 802 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 HUS1O60921 280 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 CAPN15O75808 1086 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 ALDH1A2O94788 518 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 TEX44Q53QW1 395 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 LDLRAD1Q5T700 205 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 RFWD3Q6PCD5 774 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 KYAT3Q6YP21 454 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 RINLQ6ZS11 566 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 MARK2Q7KZI7 788 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 TTC7BQ86TV6 843 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 ALYREFQ86V81 257 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 PPP1R14CQ8TAE6 165 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 MMADHCQ9H3L0 296 aaPredicted RBP18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 ABHD16BQ9H3Z7 469 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 EIF2B3Q9NR50 452 aaKnown RBP18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 ARHGEF4Q9NR80 690 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 TAS2R1Q9NYW7 299 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 MFHAS1Q9Y4C4 1052 aa18.49■□□□□ 0.55
CCHCR1-228ENST00000509552 H3BRJ5 948 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 AP1B1Q10567 949 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 STX3Q13277 289 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 DBN1Q16643 649 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 SV2CQ496J9 727 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 STXBP5Q5T5C0 1151 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 IQSEC1Q6DN90 963 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 PDCD7Q8N8D1 485 aaKnown RBP18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 CFAP61Q8NHU2 1237 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 ACMSDQ8TDX5 336 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 ATP2A3Q93084 1043 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 NAF1Q96HR8 494 aaKnown RBP18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 KLK14Q9P0G3 267 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 ARMCX1Q9P291 453 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 PPARGC1AQ9UBK2 798 aaKnown RBP18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 LRRC42Q9Y546 428 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 NR2E3Q9Y5X4 410 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 NRCAMQ92823 1304 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 SMIM35A0A1B0GVV1 85 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 F5H423 210 aaPredicted RBP18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 SPTLC1O15269 473 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 ATP5BP06576 529 aaKnown RBP18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 KITP10721 976 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 CYP2C9P11712 490 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 DCAF6Q58WW2 860 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 ZNF618Q5T7W0 954 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 ADGRF2Q8IZF7 708 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 MAML3Q96JK9 1138 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 TSPAN18Q96SJ8 248 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 NAT9Q9BTE0 207 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 GJD2Q9UKL4 321 aa18.48■□□□□ 0.55
CCHCR1-228ENST00000509552 PIN4Q9Y237 131 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms