RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DUS2Q9NX74 493 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 TAS2R14Q9NYV8 317 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 CLIC5Q9NZA1 410 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 SFMBT1Q9UHJ3 866 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 NDRG2Q9UN36 371 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 NAALADL1Q9UQQ1 740 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 DCHS1Q96JQ0 3298 aa7.54□□□□□ -1.2
TOPBP1-207ENST00000509162 EML5Q05BV3 1969 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 ANKRD33BA6NCL7 494 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 PES1O00541 588 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 CAPN5O15484 640 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 HOXC11O43248 304 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 LTFP02788 710 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 VAMP1P23763 118 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 SLC6A4P31645 630 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 USP8P40818 1118 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 PPP3CCP48454 512 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 IFNAR2P48551 515 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 CLCN5P51795 746 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 ATXN1P54253 815 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 ZNF445P59923 1031 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 SATB1Q01826 763 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 UBXN1Q04323 297 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 GOLGA8FQ08AF8 430 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 GOLGA8DPQ0D2H9 430 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 CETN1Q12798 172 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 NR1I3Q14994 352 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 UBXN2BQ14CS0 331 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 PDGFRLQ15198 375 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 STILQ15468 1287 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 TRIP4Q15650 581 aaPredicted RBP7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 ITPRIPL2Q3MIP1 535 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 FAM133BQ5BKY9 247 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 TMEM196Q5HYL7 178 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 C10orf120Q5SQS8 335 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 LY6G5CQ5SRR4 150 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 FYB2Q5VWT5 728 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 NAA35Q5VZE5 725 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 RNF43Q68DV7 783 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 TOGARAM2Q6ZUX3 1019 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 BNIPLQ7Z465 357 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 XYLT1Q86Y38 959 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 TMEM25Q86YD3 366 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 FMNL3Q8IVF7 1028 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 ZNF276Q8N554 614 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 DTWD2Q8NBA8 298 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 IRF7Q92985 503 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 E2F7Q96AV8 911 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 SLC39A13Q96H72 371 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 HSFY1Q96LI6 401 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 STK33Q9BYT3 514 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 CHRDQ9H2X0 955 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 CNGB3Q9NQW8 809 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 TLR8Q9NR97 1041 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 HESX1Q9UBX0 185 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 ZMYM5Q9UJ78 669 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 AGO1Q9UL18 857 aaKnown RBP7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 KIAA1257Q9ULG3 409 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 NENFQ9UMX5 172 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 LAMA1P25391 3075 aa7.53□□□□□ -1.2
TOPBP1-207ENST00000509162 DNAH14Q0VDD8 3507 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 NYNRINQ9P2P1 1898 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 GOLGA6L7A0A1B0GV03 622 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 A0A1W2PQC6 194 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 SLC12A8A0AV02 714 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 E2F8A0AVK6 867 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 LRRC53A6NM62 1247 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 FAM170BA6NMN3 283 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 K7ESF4 209 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 TRDMT1O14717 391 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 IRAK2O43187 625 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 DAB1O75553 588 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 GRAP2O75791 330 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 GYPCP04921 128 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 UNGP13051 313 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 SNRPBP14678 240 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 CORO1AP31146 461 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 FLT3P36888 993 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 GABRB2P47870 512 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 PFKPQ01813 784 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 KDSRQ06136 332 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 ZNF252P-AS1Q0IIN9 211 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 MTAPQ13126 283 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 HGSNATQ68CP4 663 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 TSSK4Q6SA08 328 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 LRSAM1Q6UWE0 723 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 HTR3DQ70Z44 454 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 IRF2BP2Q7Z5L9 587 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 PHLDB2Q86SQ0 1253 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 YAF2Q8IY57 180 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 SIX6OS1Q8N1H7 587 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 RNF214Q8ND24 703 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 JOSD2Q8TAC2 188 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 IRGQQ8WZA9 623 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 FAM3CQ92520 227 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 COL26A1Q96A83 441 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 CDK15Q96Q40 435 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 XPO4Q9C0E2 1151 aaKnown RBP7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 LHX5Q9H2C1 402 aa7.52□□□□□ -1.21
TOPBP1-207ENST00000509162 LRRC4Q9HBW1 653 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms