RNA–Protein interactions for RNA: ENST00000508740.5

NR1I3-226, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-226ENST00000508740 CSPG4P5Q96PW8 444 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 TMEM175Q9BSA9 504 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 TMEM109Q9BVC6 243 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 MRPL9Q9BYD2 267 aaKnown RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 CDC42EP4Q9H3Q1 356 aaKnown RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 USP29Q9HBJ7 922 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 WDR6Q9NNW5 1121 aaKnown RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 PIGVQ9NUD9 493 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 MARCH5Q9NX47 278 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 CWC15Q9P013 229 aaKnown RBP8.25□□□□□ -1.09
NR1I3-226ENST00000508740 COX16Q9P0S2 106 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 FBXW11Q9UKB1 542 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 HEY1Q9Y5J3 304 aa8.25□□□□□ -1.09
NR1I3-226ENST00000508740 NCOR1O75376 2440 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-226ENST00000508740 CFAP69A5D8W1 941 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 OR6C75A6NL08 312 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 TBKBP1A7MCY6 615 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 HMGB1P1B2RPK0 211 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-226ENST00000508740 H3BRJ5 948 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 TNFRSF10BO14763 440 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 TTC4O95801 387 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 SHBGP04278 402 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 GOT1P17174 413 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 FGFR3P22607 806 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 AMPD1P23109 780 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 ARL4AP40617 200 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 SCAPQ12770 1279 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 XRCC4Q13426 336 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 EFHC2Q5JST6 749 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 AGBL2Q5U5Z8 902 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 KCTD16Q68DU8 428 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 VSTM1Q6UX27 236 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 DEFB128Q7Z7B8 93 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 CROCCP2Q86T23 111 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 ZC3H18Q86VM9 953 aaKnown RBP8.24□□□□□ -1.09
NR1I3-226ENST00000508740 PYROXD2Q8N2H3 581 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 SCAMP5Q8TAC9 235 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 ADAM32Q8TC27 787 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 RNF139Q8WU17 664 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 EDEM1Q92611 657 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 PRCCQ92733 491 aaPredicted RBP8.24□□□□□ -1.09
NR1I3-226ENST00000508740 RTP4Q96DX8 246 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 ATP6V1G3Q96LB4 118 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 C8orf48Q96LL4 319 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 TRIM62Q9BVG3 475 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 GPR62Q9BZJ7 368 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 PPP1R12CQ9BZL4 782 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 PSD3Q9NYI0 1048 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 TBX21Q9UL17 535 aa8.24□□□□□ -1.09
NR1I3-226ENST00000508740 SF3B1O75533 1304 aaKnown RBP eCLIP8.24□□□□□ -1.09
NR1I3-226ENST00000508740 SPTBN5Q9NRC6 3674 aaKnown RBP8.23□□□□□ -1.09
NR1I3-226ENST00000508740 PRUNE2Q8WUY3 3088 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 H7C4K7 107 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 ALOX15BO15296 676 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 KCNN4O15554 427 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 TBC1D4O60343 1298 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 LILRB3O75022 631 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 ACSL3O95573 720 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 RBL1P28749 1068 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 RFC2P35250 354 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 MAGEA4P43358 317 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 MAGEA11P43364 429 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 HCAR3P49019 387 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 CXCR3P49682 368 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 SLC5A3P53794 718 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 YWHAGP61981 247 aaKnown RBP eCLIP8.23□□□□□ -1.09
NR1I3-226ENST00000508740 GBE1Q04446 702 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 SLC10A2Q12908 348 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-226ENST00000508740 ELAVL2Q12926 359 aaKnown RBP8.23□□□□□ -1.09
NR1I3-226ENST00000508740 DPYSQ14117 519 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 IKBKEQ14164 716 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 KYNUQ16719 465 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 LRRC26Q2I0M4 334 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 ARL13BQ3SXY8 428 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 KRT71Q3SY84 523 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 CTXN3Q4LDR2 81 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 C6orf118Q5T5N4 469 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 UBAP2Q5T6F2 1119 aaKnown RBP8.23□□□□□ -1.09
NR1I3-226ENST00000508740 EMC10Q5UCC4 262 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 NCBP2-AS2Q69YL0 99 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 ZNF280DQ6N043 979 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 FUT10Q6P4F1 479 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 CNKSR3Q6P9H4 555 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.23□□□□□ -1.09
NR1I3-226ENST00000508740 B4GALNT4Q76KP1 1039 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 BZW1Q7L1Q6 419 aaKnown RBP8.23□□□□□ -1.09
NR1I3-226ENST00000508740 SCD5Q86SK9 330 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 TAC4Q86UU9 113 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 HOOK3Q86VS8 718 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 CEP57Q86XR8 500 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 CDKL3Q8IVW4 592 aaPredicted RBP8.23□□□□□ -1.09
NR1I3-226ENST00000508740 SCN4BQ8IWT1 228 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 PPIL6Q8IXY8 311 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 NUP93Q8N1F7 819 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 SH2D3CQ8N5H7 860 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 NAT8LQ8N9F0 302 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 DQX1Q8TE96 717 aaKnown RBP8.23□□□□□ -1.09
NR1I3-226ENST00000508740 CPT1BQ92523 772 aa8.23□□□□□ -1.09
NR1I3-226ENST00000508740 RBM15Q96T37 977 aaKnown RBP eCLIP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms