RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 FYNP06241 537 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 CHRNB1P11230 501 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 ADH5P11766 374 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 TARSP26639 723 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 CORO1AP31146 461 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 EIF2DP41214 584 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 NSFP46459 744 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 RPS9P46781 194 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 GABRB2P47870 512 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 SLC11A2P49281 568 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 VCPP55072 806 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 NOMO3P69849 1222 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 CDK17Q00537 523 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 FMO1Q01740 532 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 PPP2R5DQ14738 602 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 TRIP4Q15650 581 aaPredicted RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 ASIC2Q16515 512 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 ANO4Q32M45 955 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 FBXO43Q4G163 708 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 PTPN20Q4JDL3 420 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 DCAF6Q58WW2 860 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 NAA35Q5VZE5 725 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 NUGGCQ68CJ6 796 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 TXNDC11Q6PKC3 985 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 FAM183BPQ6ZVS7 135 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 IRF2BP2Q7Z5L9 587 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 TMEM25Q86YD3 366 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 DENND1CQ8IV53 801 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 CCDC105Q8IYK2 499 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 DTWD2Q8NBA8 298 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 CPLX3Q8WVH0 158 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 AZIN2Q96A70 460 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 CLDN23Q96B33 292 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 SERPINB11Q96P15 392 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 PNKPQ96T60 521 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 DDX50Q9BQ39 737 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 IER2Q9BTL4 223 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 SPATA6Q9NWH7 488 aaPredicted RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.57□□□□□ -1.2
GYPB-206ENST00000506516 RRN3Q9NYV6 651 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 AIPL1Q9NZN9 384 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 NOCTQ9UK39 431 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 CDV3Q9UKY7 258 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 AGO1Q9UL18 857 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 TLR6Q9Y2C9 796 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 BZW2Q9Y6E2 419 aaKnown RBP7.57□□□□□ -1.2
GYPB-206ENST00000506516 TTC28Q96AY4 2481 aa7.57□□□□□ -1.2
GYPB-206ENST00000506516 GREB1Q4ZG55 1949 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 NUP210Q8TEM1 1887 aaPredicted RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 A0A1W2PQJ5 194 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 SHISA7A6NL88 538 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 LRRC53A6NM62 1247 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 HOXC11O43248 304 aaPredicted RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 GREM1O60565 184 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 ATG13O75143 517 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 TRUB2O95900 331 aaKnown RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 F9P00740 461 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 KLKB1P03952 638 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 CYP1A1P04798 512 aaPredicted RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 CYP17A1P05093 508 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 TPM1P09493 284 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 SLC2A3P11169 496 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 UNGP13051 313 aaPredicted RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 CHRNB2P17787 502 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 NOS2P35228 1153 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 SCNN1AP37088 669 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 PBX1P40424 430 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 TBX4P57082 545 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 RNASE9P60153 205 aaKnown RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 ZBED6P86452 979 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 RING1Q06587 406 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 KLHL30Q0D2K2 578 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 MTA1Q13330 715 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 NNTQ13423 1086 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 FZD5Q13467 585 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 TAF5Q15542 800 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 CLEC16AQ2KHT3 1053 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 TMEM196Q5HYL7 178 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 LY6G5CQ5SRR4 150 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 ADGRF1Q5T601 910 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 FAM102AQ5T9C2 384 aaPredicted RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 SYPL2Q5VXT5 272 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 OLFML1Q6UWY5 402 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 Q6ZNB5 142 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 TPGS1Q6ZTW0 290 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 SND1Q7KZF4 910 aaKnown RBP eCLIP7.56□□□□□ -1.25e-6■■■□□ 15.5
GYPB-206ENST00000506516 SLC26A9Q7LBE3 791 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 C1orf210Q8IVY1 113 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 DEFB106AQ8N104 65 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 CPXM2Q8N436 756 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 NAT16Q8N8M0 369 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 DQX1Q8TE96 717 aaKnown RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 DDI1Q8WTU0 396 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 SLC20A1Q8WUM9 679 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 SYN2Q92777 582 aaPredicted RBP7.56□□□□□ -1.2
GYPB-206ENST00000506516 RNF34Q969K3 372 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 WBP2Q969T9 261 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 CHFRQ96EP1 664 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 SLC2A13Q96QE2 648 aa7.56□□□□□ -1.2
GYPB-206ENST00000506516 BBS2Q9BXC9 721 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms