RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 MMP8P22894 467 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 CCR3P51677 355 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 RNASE9P60153 205 aaKnown RBP18.55■□□□□ 0.56
SMN1-204ENST00000506163 TPM4P67936 248 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 CLEC16AQ2KHT3 1053 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 ZNF528Q3MIS6 628 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 NUGGCQ68CJ6 796 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 ZDHHC17Q8IUH5 632 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 UNC45BQ8IWX7 931 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 RNF214Q8ND24 703 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 EXOC4Q96A65 974 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 AZIN2Q96A70 460 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 IRF2BPLQ9H1B7 796 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 TMEM59LQ9UK28 342 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 MYO6Q9UM54 1294 aa18.55■□□□□ 0.56
SMN1-204ENST00000506163 TBC1D3BA6NDS4 549 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.54■□□□□ 0.56
SMN1-204ENST00000506163 GOLGA8SH3BPF8 625 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 LATS1O95835 1130 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 FERP16591 822 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 HOXD9P28356 352 aaPredicted RBP18.54■□□□□ 0.56
SMN1-204ENST00000506163 FLT3P36888 993 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 NBL1P41271 181 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 SNX16P57768 344 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 CDK17Q00537 523 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 PIK3R6Q5UE93 754 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 TERB1Q8NA31 727 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 NT5C3BQ969T7 300 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 FAM122AQ96E09 287 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 NPY6RQ99463 290 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 C11orf70Q9BRQ4 267 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 TRIM62Q9BVG3 475 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 NUCKS1Q9H1E3 243 aaKnown RBP18.54■□□□□ 0.56
SMN1-204ENST00000506163 AIPL1Q9NZN9 384 aa18.54■□□□□ 0.56
SMN1-204ENST00000506163 USP34Q70CQ2 3546 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 SYNJ2BP-COX16A0A087WUM0 186 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 KCNU1A8MYU2 1149 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 GJB6O95452 261 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 HNRNPLP14866 589 aaKnown RBP eCLIP18.53■□□□□ 0.56
SMN1-204ENST00000506163 NOS2P35228 1153 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 TIE1P35590 1138 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 SCNN1AP37088 669 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 MATKP42679 507 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 TNFRSF4P43489 277 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 CENPCQ03188 943 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 FAM102AQ5T9C2 384 aaPredicted RBP18.53■□□□□ 0.56
SMN1-204ENST00000506163 RNF43Q68DV7 783 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 GRAMD4Q6IC98 578 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 TRIM72Q6ZMU5 477 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 CCDC33Q8N5R6 958 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 IL17RCQ8NAC3 791 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 DDI1Q8WTU0 396 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 PRICKLE1Q96MT3 831 aaPredicted RBP18.53■□□□□ 0.56
SMN1-204ENST00000506163 XPO6Q96QU8 1125 aaKnown RBP18.53■□□□□ 0.56
SMN1-204ENST00000506163 XPO4Q9C0E2 1151 aaKnown RBP18.53■□□□□ 0.56
SMN1-204ENST00000506163 ANLNQ9NQW6 1124 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 DDIT4Q9NX09 232 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 TAS2R14Q9NYV8 317 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 COX16Q9P0S2 106 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 ZFHX2Q9C0A1 2572 aaPredicted RBP18.53■□□□□ 0.56
SMN1-204ENST00000506163 GPR179Q6PRD1 2367 aa18.53■□□□□ 0.56
SMN1-204ENST00000506163 I6L893 689 aaPredicted RBP18.52■□□□□ 0.56
SMN1-204ENST00000506163 MOCS2O96007 188 aaPredicted RBP18.52■□□□□ 0.56
SMN1-204ENST00000506163 SLC11A2P49281 568 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 DGKGP49619 791 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 ZNF445P59923 1031 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 GEN1Q17RS7 908 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 FIGNQ5HY92 759 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 C10orf76Q5T2E6 689 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 ZNF571Q7Z3V5 609 aaPredicted RBP18.52■□□□□ 0.56
SMN1-204ENST00000506163 DNAAF5Q86Y56 855 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 PHF13Q86YI8 300 aaPredicted RBP18.52■□□□□ 0.56
SMN1-204ENST00000506163 ALLCQ8N6M5 410 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 ZBTB44Q8NCP5 570 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 WFDC5Q8TCV5 224 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 TMA16Q96EY4 203 aaKnown RBP18.52■□□□□ 0.56
SMN1-204ENST00000506163 EDEM3Q9BZQ6 932 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 FAM204AQ9H8W3 233 aa18.52■□□□□ 0.56
SMN1-204ENST00000506163 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.52■□□□□ 0.56
SMN1-204ENST00000506163 PROB1E7EW31 1015 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 ADAM23O75077 832 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 SKILP12757 684 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 PXNP49023 591 aaPredicted RBP18.51■□□□□ 0.55
SMN1-204ENST00000506163 FNTBP49356 437 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 ATXN1P54253 815 aaKnown RBP18.51■□□□□ 0.55
SMN1-204ENST00000506163 RPS24P62847 133 aaKnown RBP18.51■□□□□ 0.55
SMN1-204ENST00000506163 MRPS21P82921 87 aaKnown RBP18.51■□□□□ 0.55
SMN1-204ENST00000506163 NME3Q13232 169 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 MPPE1Q53F39 396 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 RAB6CQ53S08 254 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 SFMBT2Q5VUG0 894 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 TMEM215Q68D42 235 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 SYT13Q7L8C5 426 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 EMC1Q8N766 993 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 ACOX2Q99424 681 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 TBCBQ99426 244 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 RAB6CQ9H0N0 254 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 HAUS4Q9H6D7 363 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 PIGVQ9NUD9 493 aa18.51■□□□□ 0.55
SMN1-204ENST00000506163 SEPT11Q9NVA2 429 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms