RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 MDM4O15151 490 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 TNFSF14O43557 240 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 EPB41P11171 864 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 RARGP13631 454 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 ITPKBP27987 946 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 MXI1P50539 228 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 C10orf120Q5SQS8 335 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 DCAF12L1Q5VU92 463 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 TCERG1LQ5VWI1 586 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 KRT39Q6A163 491 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 METTL3Q86U44 580 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 BHMTQ93088 406 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 HEXIM2Q96MH2 286 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 DUSP9Q99956 384 aaKnown RBP16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 BBS2Q9BXC9 721 aa16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.82■□□□□ 0.28
PDLIM7-213ENST00000505074 GOLGA6L4A6NEF3 574 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 J3QKU1 62 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 CETN3O15182 167 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 BNC1Q01954 994 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 CCDC157Q569K6 752 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 DCAF17Q5H9S7 520 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 PPP1R26Q5T8A7 1209 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 TADA2BQ86TJ2 420 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 NXPE2Q96DL1 559 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 KLF16Q9BXK1 252 aaPredicted RBP16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 CYLDQ9NQC7 956 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 ITM2CQ9NQX7 267 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 RMND1Q9NWS8 449 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 OSER1Q9NX31 292 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 DNMT3LQ9UJW3 386 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 BTBD3Q9Y2F9 522 aa16.81■□□□□ 0.28
PDLIM7-213ENST00000505074 KALRNO60229 2985 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 CAPN8A6NHC0 703 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 CYSRT1A8MQ03 144 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 METTL12A8MUP2 240 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 PRRT4C9JH25 899 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 HHLA1C9JL84 531 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 RRP8O43159 456 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 STX10O60499 249 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 RALAP11233 206 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 TYRP14679 529 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 OXTRP30559 389 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 EIF2S3P41091 472 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 PNOCQ13519 176 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 STARD3Q14849 445 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 EDRF1Q3B7T1 1238 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 HTR3DQ70Z44 454 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 TMPRSS12Q86WS5 348 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 FBXL13Q8NEE6 735 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 FCRL3Q96P31 734 aaPredicted RBP16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 TSG101Q99816 390 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 NMUR1Q9HB89 426 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 PNPLA8Q9NP80 782 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 USP36Q9P275 1121 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 EIF2B4Q9UI10 523 aaKnown RBP16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 RASAL2Q9UJF2 1139 aa16.8■□□□□ 0.28
PDLIM7-213ENST00000505074 TENM4Q6N022 2769 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 A0A1B0GVT2 93 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 WASH3PC4AMC7 463 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 PLK4O00444 970 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 CACNG3O60359 315 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 HMBSP08397 361 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 GTF2H1P32780 548 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 GRK6P43250 576 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 KIF11P52732 1056 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 SLC8A3P57103 927 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 ENPEPQ07075 957 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 PTPRNQ16849 979 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 ZCWPW2Q504Y3 356 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 DHRS13Q6UX07 377 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 SEMA4DQ92854 862 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 DUSP16Q9BY84 665 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 CISHQ9NSE2 258 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 WDR35Q9P2L0 1181 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 CABIN1Q9Y6J0 2220 aa16.79■□□□□ 0.28
PDLIM7-213ENST00000505074 PLA2G4AP47712 749 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 DGKGP49619 791 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 PSEN1P49768 467 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 CFHR1Q03591 330 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 EFEMP1Q12805 493 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 FUT11Q495W5 492 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 C6orf118Q5T5N4 469 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 RSRC2Q7L4I2 434 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 CCDC186Q7Z3E2 898 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 TTC39CQ8N584 583 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 TMEM176AQ96HP8 235 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 CDK5RAP1Q96SZ6 601 aaKnown RBP16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 ARID3AQ99856 593 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 PLK2Q9NYY3 685 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 STON1Q9Y6Q2 735 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 KNTC1P50748 2209 aa16.78■□□□□ 0.28
PDLIM7-213ENST00000505074 TEX51A0A1B0GUA7 166 aa16.77■□□□□ 0.28
PDLIM7-213ENST00000505074 KCNJ18B7U540 433 aa16.77■□□□□ 0.28
PDLIM7-213ENST00000505074 SMC2O95347 1197 aa16.77■□□□□ 0.28
PDLIM7-213ENST00000505074 CSNK1EP49674 416 aaKnown RBP16.77■□□□□ 0.28
PDLIM7-213ENST00000505074 TPMTP51580 245 aa16.77■□□□□ 0.28
PDLIM7-213ENST00000505074 AFF3P51826 1226 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms