RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 COG7P83436 770 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 MS4A13Q5J8X5 152 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 FAM102AQ5T9C2 384 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 NUGGCQ68CJ6 796 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 DNAAF5Q86Y56 855 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 SUGP1Q8IWZ8 645 aaKnown RBP8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 ACRBPQ8NEB7 543 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 CFAP57Q96MR6 1250 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 TSGA10Q9BZW7 698 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 CD320Q9NPF0 282 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 OSGEPQ9NPF4 335 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 MARCH2Q9P0N8 246 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 CHORDC1Q9UHD1 332 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 CPQQ9Y646 472 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 NUMBLQ9Y6R0 609 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 CEP192Q8TEP8 1941 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 PSTPIP1O43586 416 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 SLC2A3P11169 496 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 ARID5AQ03989 594 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 DNAJC24Q6P3W2 148 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 NT5DC3Q86UY8 548 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 ZNF564Q8TBZ8 553 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 ZNF653Q96CK0 615 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 MCEEQ96PE7 176 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 ATXN3LQ9H3M9 355 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 HCN2Q9UL51 889 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 EFR3BQ9Y2G0 817 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 HS3ST4Q9Y661 456 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 LRP4O75096 1905 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 OTOL1A6NHN0 477 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 ATMINO43313 823 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 SRFP11831 508 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 MYL4P12829 197 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 L1CAMP32004 1257 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 CYP2S1Q96SQ9 504 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 SLC2A11Q9BYW1 496 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 OSBPL6Q9BZF3 934 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 KCNK12Q9HB15 430 aa8.61□□□□□ -1.03
CDC42SE2-208ENST00000505065 HEPACAM2A8MVW5 462 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 GJB6O95452 261 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 ARHGAP29Q52LW3 1261 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 UNC45BQ8IWX7 931 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 KATNAL2Q8IYT4 538 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 KIAA1524Q8TCG1 905 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 TBC1D14Q9P2M4 693 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 PPP2R2CQ9Y2T4 447 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 TRDMT1O14717 391 aaKnown RBP8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 ACSL4O60488 711 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 PAPSS2O95340 614 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 GJA1P17302 382 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 HOXD9P28356 352 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 ADRA1BP35368 520 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 C2CD6Q53TS8 623 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 TJAP1Q5JTD0 557 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 ADGRF1Q5T601 910 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 BTBD8Q5XKL5 378 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 OR6B2Q6IFH4 312 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 UBALD2Q8IYN6 164 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 CCDC185Q8N715 623 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 MAB21L3Q8N8X9 362 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 BPIFB1Q8TDL5 484 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 SH3RF2Q8TEC5 729 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 EZH1Q92800 747 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 GCNAQ96QF7 691 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 TMEM248Q9NWD8 314 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 TTC7AQ9ULT0 858 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 STAP1Q9ULZ2 295 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 PCDHA3Q9Y5H8 950 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 GOLGA6L6A8MZA4 724 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 DCLK1O15075 740 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 CYP17A1P05093 508 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 TCF4P15884 667 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 PSMC3P17980 439 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 HDCP19113 662 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 CBLBQ13191 982 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 MEI1Q5TIA1 1274 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 RPP25Q9BUL9 199 aaKnown RBP8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 SELENOOQ9BVL4 669 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 DLGAP2Q9P1A6 1054 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 MYO1AQ9UBC5 1043 aa8.6□□□□□ -1.03
CDC42SE2-208ENST00000505065 NCAM1P13591 858 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 OPRD1P41143 372 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 C15orf59Q2T9L4 293 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 TDRD12Q587J7 1177 aaKnown RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 DCAF12L1Q5VU92 463 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 SLC9A4Q6AI14 798 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 CXorf57Q6NSI4 855 aaKnown RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 C1orf228Q6PIY5 440 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 RHBDF2Q6PJF5 856 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 ZNF572Q7Z3I7 529 aaPredicted RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 BMP8AQ7Z5Y6 402 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 ANKS1BQ7Z6G8 1248 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 KDM1BQ8NB78 822 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 NOL6Q9H6R4 1146 aaKnown RBP8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 WNT16Q9UBV4 365 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 SFMBT1Q9UHJ3 866 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 DUSP10Q9Y6W6 482 aa8.59□□□□□ -1.03
CDC42SE2-208ENST00000505065 PLXNB3Q9ULL4 1909 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms