RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.52□□□□□ -0.73
DDX41-203ENST00000504781 DQX1Q8TE96 717 aaKnown RBP10.52□□□□□ -0.73
DDX41-203ENST00000504781 C1orf54Q8WWF1 131 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 RNF34Q969K3 372 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 SERPINB11Q96P15 392 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 ASB2Q96Q27 587 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 PNKPQ96T60 521 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 HERPUD2Q9BSE4 406 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 CYP4F11Q9HBI6 524 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 CALCOCO1Q9P1Z2 691 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 ZNF148Q9UQR1 794 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 RAD54BQ9Y620 910 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 PTPRSQ13332 1948 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 GREB1Q4ZG55 1949 aa10.52□□□□□ -0.73
DDX41-203ENST00000504781 VCANP13611 3396 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 COL4A4P53420 1690 aaPredicted RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 KCNU1A8MYU2 1149 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 PRRG1O14668 218 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 APOL1O14791 398 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 TTI1O43156 1089 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 IRAK2O43187 625 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 LPXNO60711 386 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 ADH1AP07327 375 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 CNPP09543 421 aaKnown RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 RARGP13631 454 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 ATF6P18850 670 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 ATP5C1P36542 298 aaKnown RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 KCNJ1P48048 391 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 ATXN1P54253 815 aaKnown RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 VCPP55072 806 aaKnown RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 MLLT6P55198 1093 aaPredicted RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 USP46P62068 366 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 VSNL1P62760 191 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 PITX1P78337 314 aaPredicted RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 NRG1Q02297 640 aaPredicted RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 RING1Q06587 406 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 ADCY2Q08462 1091 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 MMRN1Q13201 1228 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 SNX1Q13596 522 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 LLGL1Q15334 1064 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 TAF12Q16514 161 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 PPP6R3Q5H9R7 873 aaPredicted RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 SDHAF4Q5VUM1 108 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 TTC27Q6P3X3 843 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 C4orf22Q6V702 233 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 SPRED2Q7Z698 418 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 MTERF4Q7Z6M4 381 aaKnown RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 JAMLQ86YT9 394 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 CCDC185Q8N715 623 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 CCDC89Q8N998 374 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 PCDH19Q8TAB3 1148 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 GIPC2Q8TF65 315 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 SLC39A13Q96H72 371 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 KLHL5Q96PQ7 755 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 TKTL2Q9H0I9 626 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 TSPYL1Q9H0U9 437 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 RETREG1Q9H6L5 497 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 FAM204AQ9H8W3 233 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 NMUR1Q9HB89 426 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 KLHL11Q9NVR0 708 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.51□□□□□ -0.732e-8■■□□□ 12.8
DDX41-203ENST00000504781 DONSONQ9NYP3 566 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 TRPM5Q9NZQ8 1165 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 CWC15Q9P013 229 aaKnown RBP10.51□□□□□ -0.73
DDX41-203ENST00000504781 OR12D3Q9UGF7 316 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 MTCH2Q9Y6C9 303 aa10.51□□□□□ -0.73
DDX41-203ENST00000504781 ZNF638Q14966 1978 aaKnown RBP10.5□□□□□ -0.73
DDX41-203ENST00000504781 LINC01553A4QN01 128 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 CFAP69A5D8W1 941 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 TNFRSF10AO00220 468 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 NCAM2O15394 837 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 HMGA1P17096 107 aaKnown RBP10.5□□□□□ -0.73
DDX41-203ENST00000504781 KLRC2P26717 231 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 TUBP50607 506 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 CLCN6P51797 869 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 COG7P83436 770 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 OTUD4Q01804 1114 aaKnown RBP10.5□□□□□ -0.73
DDX41-203ENST00000504781 CAV1Q03135 178 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 TFF2Q03403 129 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 IFRD2Q12894 506 aaPredicted RBP10.5□□□□□ -0.73
DDX41-203ENST00000504781 SEMA3BQ13214 749 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 PTK6Q13882 451 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 PAFAH1B3Q15102 231 aaKnown RBP10.5□□□□□ -0.73
DDX41-203ENST00000504781 NOMO1Q15155 1222 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 PPP1R7Q15435 360 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 OASLQ15646 514 aaKnown RBP10.5□□□□□ -0.73
DDX41-203ENST00000504781 TRIP4Q15650 581 aaPredicted RBP10.5□□□□□ -0.73
DDX41-203ENST00000504781 CA9Q16790 459 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 BEND6Q5SZJ8 279 aaPredicted RBP10.5□□□□□ -0.73
DDX41-203ENST00000504781 EMBQ6PCB8 327 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 FBXO38Q6PIJ6 1188 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 GSTA5Q7RTV2 222 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 DNAJB7Q7Z6W7 309 aaPredicted RBP10.5□□□□□ -0.73
DDX41-203ENST00000504781 TAC4Q86UU9 113 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 UNC45BQ8IWX7 931 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 PQLC3Q8N755 202 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 ATP6V0D2Q8N8Y2 350 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 ACTL9Q8TC94 416 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 GPR152Q8TDT2 470 aa10.5□□□□□ -0.73
DDX41-203ENST00000504781 ADAMTS19Q8TE59 1207 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms