RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 TRIP4Q15650 581 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 PDE12Q6L8Q7 609 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 RFX8Q6ZV50 586 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 GSTA5Q7RTV2 222 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 CDKL3Q8IVW4 592 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 ALLCQ8N6M5 410 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 PQLC3Q8N755 202 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 PLD5Q8N7P1 536 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 BBOF1Q8ND07 529 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 PCDH19Q8TAB3 1148 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 GPR152Q8TDT2 470 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 AUTS2Q8WXX7 1259 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 TRIM51Q9BSJ1 452 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 PCDH9Q9HC56 1237 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 ARHGEF4Q9NR80 690 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 TLR9Q9NR96 1032 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 OSER1Q9NX31 292 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 TRPM5Q9NZQ8 1165 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 CWC15Q9P013 229 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 PCDH10Q9P2E7 1040 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 SLC12A6Q9UHW9 1150 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 MAGED2Q9UNF1 606 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 ZNF148Q9UQR1 794 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 HBS1LQ9Y450 684 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 PCDHA11Q9Y5I1 949 aa12.37□□□□□ -0.43
POLR2J3-210ENST00000504677 ZSCAN5CA6NGD5 496 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 DAPK3O43293 454 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 CREB3O43889 395 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 TLR5O60602 858 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 GLUD1P00367 558 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 HMGA1P17096 107 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 GOT1P17174 413 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 STIP1P31948 543 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 SERPINB6P35237 376 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 MAGEA10P43363 369 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 TBX4P57082 545 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 CAV1Q03135 178 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 TWF1Q12792 350 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 CALCOCO2Q13137 446 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 DPYSQ14117 519 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 C10orf120Q5SQS8 335 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 BEND6Q5SZJ8 279 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 HECTD3Q5T447 861 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 ELMOD1Q8N336 334 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 ATP6V0D2Q8N8Y2 350 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 AENQ8WTP8 325 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 IFT81Q8WYA0 676 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 CAVIN3Q969G5 261 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 PSMG2Q969U7 264 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 SLC39A13Q96H72 371 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 ZNF512Q96ME7 567 aaPredicted RBP12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 KLHL5Q96PQ7 755 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 TGS1Q96RS0 853 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 FERMT1Q9BQL6 677 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 DONSONQ9NYP3 566 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 MARCH2Q9P0N8 246 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 WHRNQ9P202 907 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 ASIC3Q9UHC3 531 aa12.36□□□□□ -0.43
POLR2J3-210ENST00000504677 ESYT3A0FGR9 886 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 ZNF840PA6NDX5 716 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 KCNU1A8MYU2 1149 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 HACD1B0YJ81 288 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 FGF10O15520 208 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 MSI1O43347 362 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 TGM5O43548 720 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 KRT14P02533 472 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 LRG1P02750 347 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 RBP3P10745 1247 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 PECAM1P16284 738 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 ITIH2P19823 946 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 CARSP49589 748 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 PGFP49763 221 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 EFEMP1Q12805 493 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 PAFAH1B3Q15102 231 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 PABPC1LQ4VXU2 614 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 NUGGCQ68CJ6 796 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 NCBP2-AS2Q69YL0 99 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 ELMSAN1Q6PJG2 1045 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 PYROXD2Q8N2H3 581 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 MRPL43Q8N983 215 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 SPPL3Q8TCT6 385 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 POF1BQ8WVV4 589 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 RSAD2Q8WXG1 361 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 SNF8Q96H20 258 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 FCRL2Q96LA5 508 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 C1orf74Q96LT6 269 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 NACA2Q9H009 215 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 DPH5Q9H2P9 285 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 MTRF1LQ9UGC7 380 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 OR12D3Q9UGF7 316 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 SFMBT1Q9UHJ3 866 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 DNMT3LQ9UJW3 386 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 NFU1Q9UMS0 254 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 NEU2Q9Y3R4 380 aa12.35□□□□□ -0.43
POLR2J3-210ENST00000504677 GBF1Q92538 1859 aa12.34□□□□□ -0.43
POLR2J3-210ENST00000504677 BCLAF3A2AJT9 711 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-210ENST00000504677 C2orf71A6NGG8 1288 aa12.34□□□□□ -0.43
POLR2J3-210ENST00000504677 H7C0C1 242 aa12.34□□□□□ -0.43
POLR2J3-210ENST00000504677 SGK1O00141 431 aa12.34□□□□□ -0.43
POLR2J3-210ENST00000504677 PPP1R12AO14974 1030 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms