RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 INTUQ9ULD6 942 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 ADGRG1Q9Y653 693 aa13.79□□□□□ -0.2
PDLIM7-212ENST00000504380 MUC6Q6W4X9 2439 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 I6L893 689 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 ARHGAP6O43182 974 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 TSPAN3O60637 253 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 ENDOD1O94919 500 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 IPO7O95373 1038 aaKnown RBP13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 NOP2P46087 812 aaKnown RBP13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 HARS2P49590 506 aaKnown RBP13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 CXCR3P49682 368 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 KPNA1P52294 538 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 HDAC4P56524 1084 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 FCHO2Q0JRZ9 810 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 MESDQ14696 234 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 NADSYN1Q6IA69 706 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 DEPDC1BQ8WUY9 529 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 OSCP1Q8WVF1 389 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 CENPIQ92674 756 aaPredicted RBP13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 NXPE3Q969Y0 559 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 MYEOVQ96EZ4 313 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 WDCPQ9H6R7 721 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 BRD9Q9H8M2 597 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 HPS4Q9NQG7 708 aa13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 THG1LQ9NWX6 298 aaKnown RBP13.78□□□□□ -0.2
PDLIM7-212ENST00000504380 OTOL1A6NHN0 477 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 KCNU1A8MYU2 1149 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 CHADO15335 359 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 BUB1O43683 1085 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 ACSL4O60488 711 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 F9P00740 461 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 APOEP02649 317 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 TCF4P15884 667 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 SLC6A4P31645 630 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 CCR1P32246 355 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 VAV2P52735 878 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 KRT83P78385 493 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 RING1Q06587 406 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 NNTQ13423 1086 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 EML3Q32P44 896 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 ARHGAP29Q52LW3 1261 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 RFWD3Q6PCD5 774 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 TPGS1Q6ZTW0 290 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 SND1Q7KZF4 910 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 STRADAQ7RTN6 431 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 UNC45BQ8IWX7 931 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 CCDC185Q8N715 623 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 ATP6V0D2Q8N8Y2 350 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 RFFLQ8WZ73 363 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 BHMTQ93088 406 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 PGAP3Q96FM1 320 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 P2RY11Q96G91 374 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 FAM83CQ9BQN1 747 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 DCLK3Q9C098 648 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 TKTL2Q9H0I9 626 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 SIK2Q9H0K1 926 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 GPATCH2LQ9NWQ4 482 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 GTSE1Q9NYZ3 720 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 MYOFQ9NZM1 2061 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 UVRAGQ9P2Y5 699 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 PCSK1NQ9UHG2 260 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 KIF26AQ9ULI4 1882 aaPredicted RBP13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 HYOU1Q9Y4L1 999 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 PAXBP1Q9Y5B6 917 aa13.77□□□□□ -0.21
PDLIM7-212ENST00000504380 TICRRQ7Z2Z1 1910 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 COL4A3Q01955 1670 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 MYO1FO00160 1098 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 ARNTLO00327 626 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 PAGE1O75459 146 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 SOX9P48436 509 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 SGSHP51688 502 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 LY6G5CQ5SRR4 150 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 PIK3R6Q5UE93 754 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 RAP1GAP2Q684P5 730 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 NUGGCQ68CJ6 796 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 C14orf80Q86SX3 495 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 TMEM25Q86YD3 366 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 ADGRG2Q8IZP9 1017 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 PEBP4Q96S96 227 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 GOLPH3Q9H4A6 298 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 LUC7LQ9NQ29 371 aaKnown RBP13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 ARHGEF38Q9NXL2 777 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 IP6K2Q9UHH9 426 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 SORCS3Q9UPU3 1222 aa13.76□□□□□ -0.21
PDLIM7-212ENST00000504380 PRR33A8MZF0 331 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 PJA2O43164 708 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 NRDCO43847 1150 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 LRCH4O75427 683 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 RNF8O76064 485 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 PROSCO94903 275 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 CYP17A1P05093 508 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 SRFP11831 508 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 MIPP30301 263 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 SSR1P43307 286 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 SLC11A2P49281 568 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 NAP1L1P55209 391 aaKnown RBP13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 RUNX3Q13761 415 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 PPP2R5DQ14738 602 aa13.75□□□□□ -0.21
PDLIM7-212ENST00000504380 PDGFRLQ15198 375 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms