RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZDHHC24Q6UX98 284 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 CXXC5Q7LFL8 322 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 ABI1Q8IZP0 508 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 STPG3Q8N7X2 389 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZNF540Q8NDQ6 660 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 SMARCC2Q8TAQ2 1214 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 SLC22A17Q8WUG5 538 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 EXOC4Q96A65 974 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 KTI12Q96EK9 354 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 WDR92Q96MX6 357 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 RUNDC3BQ96NL0 473 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 DACH2Q96NX9 599 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 FUZQ9BT04 418 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 PITHD1Q9GZP4 211 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 EPB41L4BQ9H329 900 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 MMADHCQ9H3L0 296 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 NELFAQ9H3P2 528 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 RMI1Q9H9A7 625 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 LIN28AQ9H9Z2 209 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 A1CFQ9NQ94 594 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 G6PC2Q9NQR9 355 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 MORF4L1Q9UBU8 362 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 TRPC5Q9UL62 973 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 LYVE1Q9Y5Y7 322 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 SPATA31A5Q5VU36 1347 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 SPATA31A7Q8IWB4 1347 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 TTC21AQ8NDW8 1320 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 MYBBP1AQ9BQG0 1328 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 KIAA0232Q92628 1395 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 USP47Q96K76 1375 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 DISP2A7MBM2 1401 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 BCL9O00512 1426 aa4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 EDC4Q6P2E9 1401 aaKnown RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 COL5A2P05997 1499 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P21-201ENST00000502313 H0Y858 1186 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 H0YAE9 185 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 RAB27BO00194 218 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 TNPO2O14787 897 aaKnown RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 CAPN9O14815 690 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 MUSKO15146 869 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 TGFB1I1O43294 461 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 HNRNPRO43390 633 aaKnown RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 KERAO60938 352 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 PHF2O75151 1096 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 ENTPD3O75355 529 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 PIAS2O75928 621 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 MATN4O95460 622 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 NTSR2O95665 410 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 C8BP07358 591 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 ANXA6P08133 673 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 KLRC1P26715 233 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 PSMC2P35998 433 aaKnown RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 GARSP41250 739 aaKnown RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 TNNT2P45379 298 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 MEOX1P50221 254 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 NOMO3P69849 1222 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 IL13RA1P78552 427 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 HMGN5P82970 282 aaKnown RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 CD83Q01151 205 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 AKAP17AQ02040 695 aaKnown RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 MEF2AQ02078 507 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 ACTN3Q08043 901 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 KLHL30Q0D2K2 578 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 SLC14A1Q13336 389 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 PDCLQ13371 301 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 PRICKLE4Q2TBC4 344 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 SLC44A4Q53GD3 710 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 DEPDC1Q5TB30 811 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 GARNL3Q5VVW2 1013 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 WDR73Q6P4I2 378 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 ABHD15Q6UXT9 468 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 CCDC73Q6ZRK6 1079 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 LRRC8DQ7L1W4 858 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 RAB11FIP2Q7L804 512 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 SLC15A4Q8N697 577 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 DNAJC5GQ8N7S2 189 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 TTLL6Q8N841 843 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 IPMKQ8NFU5 416 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 GPR150Q8NGU9 434 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 GABPB2Q8TAK5 448 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 SMCR8Q8TEV9 937 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 SEPT1Q8WYJ6 367 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 PGAP3Q96FM1 320 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 PERPQ96FX8 193 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 CEP95Q96GE4 821 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 RBM15Q96T37 977 aaKnown RBP eCLIP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 LBHD1Q9BQE6 289 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 APOL6Q9BWW8 343 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 PHF7Q9BWX1 381 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 DNAI2Q9GZS0 605 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 VPS33BQ9H267 617 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 MUC13Q9H3R2 512 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 COPS7BQ9H9Q2 264 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 HEYLQ9NQ87 328 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 TBCCD1Q9NVR7 557 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 HCFC1R1Q9NWW0 138 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 ADPRHL2Q9NX46 363 aa4.61□□□□□ -1.67
HMGB1P21-201ENST00000502313 MCM9Q9NXL9 1143 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms