RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 BCAT2O15382 392 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 GPRIN2O60269 458 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 FAM189A1O60320 539 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 KLHL41O60662 606 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 KPNA6O60684 536 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 AOC2O75106 756 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 PEX14O75381 377 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 NDUFA10O95299 355 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 CRYABP02511 175 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 CYP21A2P08686 494 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 LTA4HP09960 611 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 SRGAP2BP0DMP2 458 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 IL7RP16871 459 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 CES1P23141 567 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 NSFP46459 744 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 BCAR1P56945 870 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 DEFA3P59666 94 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 LACTBP83111 547 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 ITIH3Q06033 890 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 OVGP1Q12889 678 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 TRAP1Q12931 704 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 IKQ13123 557 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 GALNT3Q14435 633 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 COL19A1Q14993 1142 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 CDK10Q15131 360 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SNAPC1Q16533 368 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 PAN2Q504Q3 1202 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 ANGEL2Q5VTE6 544 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 DENND2CQ68D51 928 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 FUT10Q6P4F1 479 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 GADL1Q6ZQY3 521 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 G2E3Q7L622 706 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 PXKQ7Z7A4 578 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SLFN11Q7Z7L1 901 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 COMMD7Q86VX2 200 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 PARGQ86W56 976 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 KLHL7Q8IXQ5 586 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 IFNL2Q8IZJ0 200 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 UNC5BQ8IZJ1 945 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 CCDC89Q8N998 374 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 C1orf127Q8N9H9 656 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 LRRC57Q8N9N7 239 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ZNF527Q8NB42 609 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 KYQ8NBH2 561 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ATP6V1C2Q8NEY4 427 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 KLHDC7BQ96G42 594 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 YTHDC1Q96MU7 727 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 THTPAQ9BU02 230 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SORBS1Q9BX66 1292 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 EHD4Q9H223 541 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ALG2Q9H553 416 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 GPATCH2Q9NW75 528 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 DDX43Q9NXZ2 648 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 UTP6Q9NYH9 597 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 RGL1Q9NZL6 768 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SIGLEC7Q9Y286 467 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SPAG9O60271 1321 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 MRC1P22897 1456 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SONP18583 2426 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 A0A0U1RQK1 487 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 RPS10-NUDT3A0A1W2PQS6 291 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 TRABD2BA6NFA1 517 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ZNF785A8K8V0 405 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 PDE2AO00408 941 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 TAPBPO15533 448 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SCN2BO60939 215 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SH3BGRLO75368 114 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 TADA3O75528 432 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 CER1O95813 267 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 RLN1P04808 185 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ACAA1P09110 424 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 GSTM1P09488 218 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 FAM157CP0CG43 387 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ALOX15P16050 662 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 RORAP35398 523 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 CARSP49589 748 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 SCNN1BP51168 640 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 INHBEP58166 350 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 MC2RQ01718 297 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SCAPQ12770 1279 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 RAB40BQ12829 278 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 TCF15Q12870 199 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SNW1Q13573 536 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 NCOA4Q13772 614 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 GNL2Q13823 731 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 ZIK1Q3SY52 487 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 ZNF385BQ569K4 471 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ANKRD20A8PQ5CZ79 823 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 TXNDC8Q6A555 127 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ABLIM2Q6H8Q1 611 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 BLOC1S2Q6QNY1 142 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 DHRS13Q6UX07 377 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SAPCD2Q86UD0 394 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ZDHHC21Q8IVQ6 265 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 FMR1NBQ8N0W7 255 aaPredicted RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 D2HGDHQ8N465 521 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 RBMXL3Q8N7X1 1067 aaKnown RBP1.51□□□□□ -2.17
XRN1-214ENST00000498077 OR5B3Q8NH48 314 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 ZNRF2Q8NHG8 242 aa1.51□□□□□ -2.17
XRN1-214ENST00000498077 SNX29Q8TEQ0 813 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms