RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 FAM217AQ8IXS0 508 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 CHPFQ8IZ52 775 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 MDGA1Q8NFP4 955 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 UCMAQ8WVF2 138 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 ZC3H10Q96K80 434 aaKnown RBP15.97■□□□□ 0.15
NUP50-219ENST00000497960 SERPINB11Q96P15 392 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 NOX5Q96PH1 765 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 TPSD1Q9BZJ3 242 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 PLCB1Q9NQ66 1216 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 SIK3Q9Y2K2 1263 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 FHOD1Q9Y613 1164 aa15.97■□□□□ 0.15
NUP50-219ENST00000497960 TCRBV21S2A2A0A5A6 115 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 PRR5-ARHGAP8B1AHC4 643 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 E5RJQ4 531 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 FOXN3O00409 490 aaPredicted RBP15.96■□□□□ 0.15
NUP50-219ENST00000497960 CAPN9O14815 690 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 HOXB2P14652 356 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 HNRNPLP14866 589 aaKnown RBP eCLIP15.96■□□□□ 0.15
NUP50-219ENST00000497960 KRT9P35527 623 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 WASP42768 502 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 SNX16P57768 344 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 ARHGAP8P85298 464 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 RING1Q06587 406 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 PDCLQ13371 301 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 E2F5Q15329 346 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 PLK5Q496M5 336 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 KLHDC7AQ5VTJ3 777 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 BEND5Q7L4P6 421 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 PGBD3Q8N328 593 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 DQX1Q8TE96 717 aaKnown RBP15.96■□□□□ 0.15
NUP50-219ENST00000497960 HMGB4Q8WW32 186 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 TMA16Q96EY4 203 aaKnown RBP15.96■□□□□ 0.15
NUP50-219ENST00000497960 SLC2A11Q9BYW1 496 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 XPO4Q9C0E2 1151 aaKnown RBP15.96■□□□□ 0.15
NUP50-219ENST00000497960 GANQ9H2C0 597 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 PARD6AQ9NPB6 346 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 STOML2Q9UJZ1 356 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 AJAP1Q9UKB5 411 aaPredicted RBP15.96■□□□□ 0.15
NUP50-219ENST00000497960 PCDHGC3Q9UN70 934 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 NAALADL1Q9UQQ1 740 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 DAAM1Q9Y4D1 1078 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 CEP83Q9Y592 693 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 DMDP11532 3685 aa15.96■□□□□ 0.15
NUP50-219ENST00000497960 A0A1W2PQC6 194 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 DCLK1O15075 740 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 PAPSS1O43252 624 aaPredicted RBP15.95■□□□□ 0.14
NUP50-219ENST00000497960 FOXD2O60548 495 aaPredicted RBP15.95■□□□□ 0.14
NUP50-219ENST00000497960 TSPAN3O60637 253 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 EPN2O95208 641 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 IGLV3-27P01718 113 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 FYNP06241 537 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 UCHL3P15374 230 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 TGM1P22735 817 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 BYSLQ13895 437 aaKnown RBP15.95■□□□□ 0.14
NUP50-219ENST00000497960 CSRP2Q16527 193 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 ANKS1BQ7Z6G8 1248 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 PASD1Q8IV76 773 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 FAM71AQ8IYT1 594 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 P2RY11Q96G91 374 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 SPACA7Q96KW9 195 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 DDX50Q9BQ39 737 aaKnown RBP15.95■□□□□ 0.14
NUP50-219ENST00000497960 LHX5Q9H2C1 402 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 PDCL3Q9H2J4 239 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 SEMA4GQ9NTN9 838 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 CYTH4Q9UIA0 394 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 HCN2Q9UL51 889 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 INVSQ9Y283 1065 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 PCDHGA5Q9Y5G8 931 aa15.95■□□□□ 0.14
NUP50-219ENST00000497960 RALGAPA1Q6GYQ0 2036 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 ABCA7Q8IZY2 2146 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 GFRA2O00451 464 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 NPC1O15118 1278 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 SDHBP21912 280 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 CLCN1P35523 988 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 POLR2FP61218 127 aaKnown RBP15.94■□□□□ 0.14
NUP50-219ENST00000497960 YWHAZP63104 245 aaKnown RBP15.94■□□□□ 0.14
NUP50-219ENST00000497960 NNTQ13423 1086 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 DRAP1Q14919 205 aaPredicted RBP15.94■□□□□ 0.14
NUP50-219ENST00000497960 NR1I3Q14994 352 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 SLC47A2Q86VL8 602 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 AZIN2Q96A70 460 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 RMDN1Q96DB5 314 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 PIWIL1Q96J94 861 aaKnown RBP15.94■□□□□ 0.14
NUP50-219ENST00000497960 PPP1R13BQ96KQ4 1090 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 SPAG5Q96R06 1193 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 ACOX2Q99424 681 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 IRX2Q9BZI1 471 aaPredicted RBP15.94■□□□□ 0.14
NUP50-219ENST00000497960 DUSP15Q9H1R2 295 aaPredicted RBP15.94■□□□□ 0.14
NUP50-219ENST00000497960 ARRDC1-AS1Q9H2J1 176 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 SYNCQ9H7C4 482 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 POPDC2Q9HBU9 364 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 NLRC4Q9NPP4 1024 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 TLR6Q9Y2C9 796 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 WDR87Q6ZQQ6 2873 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 GON4LQ3T8J9 2241 aa15.94■□□□□ 0.14
NUP50-219ENST00000497960 EPHB6O15197 1021 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 IRAK2O43187 625 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 MAP3K13O43283 966 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 TIMM44O43615 452 aa15.93■□□□□ 0.14
NUP50-219ENST00000497960 ACSL4O60488 711 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms