RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 IRX2Q9BZI1 471 aaPredicted RBP12.9□□□□□ -0.34
CLDN12-213ENST00000496677 MIS12Q9H081 205 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 LMBRD1Q9NUN5 540 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 ELOVL2Q9NXB9 296 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 CALCOCO1Q9P1Z2 691 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 APEX2Q9UBZ4 518 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 AJAP1Q9UKB5 411 aaPredicted RBP12.9□□□□□ -0.34
CLDN12-213ENST00000496677 RAD54BQ9Y620 910 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 STON1Q9Y6Q2 735 aa12.9□□□□□ -0.34
CLDN12-213ENST00000496677 GON4LQ3T8J9 2241 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 IGHV1OR15-9A0A0B4J2B8 117 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 GOLGA6L7A0A1B0GV03 622 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 NPC1O15118 1278 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 PAPSS1O43252 624 aaPredicted RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 MED7O43513 233 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 TIMM44O43615 452 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 TSPAN3O60637 253 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 LETM1O95202 739 aaPredicted RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 ERCC5P28715 1186 aaPredicted RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 PTGER3P43115 390 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 ACADSBP45954 432 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 SGSHP51688 502 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 ZNF445P59923 1031 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 EIF4EBP2Q13542 120 aaPredicted RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 EXOC3L4Q17RC7 722 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 AASDHQ4L235 1098 aaPredicted RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 FAM133BQ5BKY9 247 aaKnown RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 MIIPQ5JXC2 388 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 STPG1Q5TH74 334 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 PIK3R6Q5UE93 754 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 PEAR1Q5VY43 1037 aaPredicted RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 NADSYN1Q6IA69 706 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 LPCAT2Q7L5N7 544 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 METTL3Q86U44 580 aaKnown RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 TMEFF1Q8IYR6 380 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 C12orf50Q8NA57 414 aaPredicted RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 DQX1Q8TE96 717 aaKnown RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 TMA16Q96EY4 203 aaKnown RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 FCRL2Q96LA5 508 aaPredicted RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 MRGPRX1Q96LB2 322 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 SLC6A17Q9H1V8 727 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 TMEM74BQ9NUR3 256 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 BCCIPQ9P287 314 aaKnown RBP eCLIP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 NAALADL1Q9UQQ1 740 aa12.89□□□□□ -0.35
CLDN12-213ENST00000496677 TNRC6BQ9UPQ9 1833 aaKnown RBP12.89□□□□□ -0.35
CLDN12-213ENST00000496677 CNOT1A5YKK6 2376 aaKnown RBP12.88□□□□□ -0.35
CLDN12-213ENST00000496677 PATE3B3GLJ2 98 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 ACSL4O60488 711 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 IGLV3-25P01717 112 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 NCAM1P13591 858 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 HLA-FP30511 346 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 SLC6A4P31645 630 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 IL12RB1P42701 662 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 DHPSP49366 369 aaPredicted RBP12.88□□□□□ -0.35
CLDN12-213ENST00000496677 TBX4P57082 545 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 NNTQ13423 1086 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 ZNF234Q14588 700 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 EIF4HQ15056 248 aaKnown RBP12.88□□□□□ -0.35
CLDN12-213ENST00000496677 ARHGAP44Q17R89 818 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 FUT11Q495W5 492 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 MPP7Q5T2T1 576 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 SYPL2Q5VXT5 272 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 NUGGCQ68CJ6 796 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 CYP2U1Q7Z449 544 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 ANKS1BQ7Z6G8 1248 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 ADIPOR2Q86V24 386 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 UNC45BQ8IWX7 931 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 SORCS1Q8WY21 1168 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 MYEOVQ96EZ4 313 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 SPACA7Q96KW9 195 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 TJP2Q9UDY2 1190 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 EVLQ9UI08 416 aaPredicted RBP12.88□□□□□ -0.35
CLDN12-213ENST00000496677 PILRBQ9UKJ0 227 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 PCDHGC3Q9UN70 934 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 TLR6Q9Y2C9 796 aa12.88□□□□□ -0.35
CLDN12-213ENST00000496677 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 E5RJQ4 531 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 FOXN3O00409 490 aaPredicted RBP12.87□□□□□ -0.35
CLDN12-213ENST00000496677 CDX4O14627 284 aaPredicted RBP12.87□□□□□ -0.35
CLDN12-213ENST00000496677 KHNYNO15037 678 aaKnown RBP12.87□□□□□ -0.35
CLDN12-213ENST00000496677 MAP3K13O43283 966 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 SART1O43290 800 aaKnown RBP12.87□□□□□ -0.35
CLDN12-213ENST00000496677 THAP12O43422 761 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 ZNF217O75362 1048 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 PRKCHP24723 683 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 GNA15P30679 374 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 CLCN1P35523 988 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 MTIF2P46199 727 aaKnown RBP12.87□□□□□ -0.35
CLDN12-213ENST00000496677 IRX4P78413 519 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 KCNMA1Q12791 1236 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 TAF5Q15542 800 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 MAN2A1Q16706 1144 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 VWA3BQ502W6 1294 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 CT47A1Q5JQC4 288 aaPredicted RBP12.87□□□□□ -0.35
CLDN12-213ENST00000496677 RFWD3Q6PCD5 774 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 SLC36A4Q6YBV0 504 aa12.87□□□□□ -0.35
CLDN12-213ENST00000496677 CREBRFQ8IUR6 639 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms