RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 ZNF569Q5MCW4 686 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 CC2D1BQ5T0F9 858 aaKnown RBP3.2□□□□□ -1.9
NCK1-212ENST00000496489 TTC22Q5TAA0 569 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 ACSM6Q6P461 480 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 PCSK4Q6UW60 755 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 DCDC5Q6ZRR9 648 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 BCDIN3DQ7Z5W3 292 aaKnown RBP3.2□□□□□ -1.9
NCK1-212ENST00000496489 MOGAT3Q86VF5 341 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 ANKRD18AQ8IVF6 992 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 C12orf76Q8N812 135 aaPredicted RBP3.2□□□□□ -1.9
NCK1-212ENST00000496489 OR52L2PQ8NGH6 319 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 AFG1LQ8WV93 481 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 THAP4Q8WY91 577 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 SARAFQ96BY9 339 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 CHFRQ96EP1 664 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 EDC3Q96F86 508 aaKnown RBP3.2□□□□□ -1.9
NCK1-212ENST00000496489 ZSCAN31Q96LW9 406 aaPredicted RBP3.2□□□□□ -1.9
NCK1-212ENST00000496489 SNX18Q96RF0 628 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 PAAF1Q9BRP4 392 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 ADGRE3Q9BY15 652 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.2□□□□□ -1.9
NCK1-212ENST00000496489 VPS16Q9H269 839 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 IKZF4Q9H2S9 585 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 CDCP1Q9H5V8 836 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 KCNK9Q9NPC2 374 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 LIN7CQ9NUP9 197 aaKnown RBP3.2□□□□□ -1.9
NCK1-212ENST00000496489 ASIC5Q9NY37 505 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 NDUFAF4Q9P032 175 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 KIF17Q9P2E2 1029 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 C11orf21Q9P2W6 132 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 ZNHIT2Q9UHR6 403 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 KCND3Q9UK17 655 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 ZBTB1Q9Y2K1 713 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 INSL6Q9Y581 213 aa3.2□□□□□ -1.9
NCK1-212ENST00000496489 LOC105369274A0A096LPK9 316 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 LOC102723532A0A0G2JNH3 316 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 AGAP5A6NIR3 686 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 TARM1B6A8C7 271 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 EIF3FO00303 357 aaPredicted RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 FYB1O15117 783 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 LARGE1O95461 756 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 MT-CO3P00414 261 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 C1RP00736 705 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 MBPP02686 304 aaPredicted RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 HSD3B1P14060 373 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 RXRAP19793 462 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 MATN1P21941 496 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 SLC8A1P32418 973 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 GRK5P34947 590 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 AARSP49588 968 aaKnown RBP eCLIP3.19□□□□□ -1.9
NCK1-212ENST00000496489 SOX10P56693 466 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 HOXA4Q00056 320 aaPredicted RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 CFHR3Q02985 330 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 LARS2Q15031 903 aaKnown RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 CNGA3Q16281 694 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 CERKLQ49MI3 558 aaPredicted RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 TMEM119Q4V9L6 283 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 ZNF362Q5T0B9 420 aaPredicted RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 SUMO4Q6EEV6 95 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 DGAT2L7PQ6IED9 249 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 SYT13Q7L8C5 426 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 FTSJ3Q8IY81 847 aaKnown RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 OR4N4Q8N0Y3 316 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 LINC01465Q8N7H1 131 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 OR6Y1Q8NGX8 325 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 GLMPQ8WWB7 406 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 AKAP1Q92667 903 aaKnown RBP eCLIP3.19□□□□□ -1.9
NCK1-212ENST00000496489 REPS1Q96D71 796 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 FYTTD1Q96QD9 318 aaKnown RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 TIMP4Q99727 224 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 DDX23Q9BUQ8 820 aaKnown RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 ELOVL1Q9BW60 279 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 ALG13Q9NP73 1137 aaKnown RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 SAGE1Q9NXZ1 904 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 RRN3Q9NYV6 651 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 SERGEFQ9UGK8 458 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 FEM1BQ9UK73 627 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 LZTS1Q9Y250 596 aa3.19□□□□□ -1.9
NCK1-212ENST00000496489 WDR33Q9C0J8 1336 aaKnown RBP3.19□□□□□ -1.9
NCK1-212ENST00000496489 TBC1D3DA0A087WVF3 549 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 TBC1D3IA0A087WXS9 549 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 TBC1D3EA0A087X179 549 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 TBC1D3KA0A087X1G2 549 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 TBC1D3BA6NDS4 549 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 TBC1D3FA6NER0 549 aaPredicted RBP3.18□□□□□ -1.9
NCK1-212ENST00000496489 MBD3L5A6NJ08 208 aaPredicted RBP3.18□□□□□ -1.9
NCK1-212ENST00000496489 B9A039 149 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 TBC1D3LB9A6J9 549 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 E7EVH7 732 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 UBE2Q2LH0YL09 131 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 H7C1Q1 480 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 CLIC1O00299 241 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 NKX2-8O15522 239 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 FAM155BO75949 473 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 ALDOAP04075 364 aaKnown RBP3.18□□□□□ -1.9
NCK1-212ENST00000496489 TBC1D3HP0C7X1 549 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 CYP2D6P10635 497 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 WT1P19544 449 aaPredicted RBP3.18□□□□□ -1.9
NCK1-212ENST00000496489 NDUFS1P28331 727 aa3.18□□□□□ -1.9
NCK1-212ENST00000496489 DUSP1P28562 367 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms