RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ATP5OP48047 213 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 DMC1Q14565 340 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 FBXO43Q4G163 708 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ADHFE1Q8IWW8 467 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ZDHHC14Q8IZN3 488 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 GJD3Q8N144 294 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 SHKBP1Q8TBC3 707 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ADAMTS19Q8TE59 1207 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 GRK7Q8WTQ7 553 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 DNASE1L2Q92874 299 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 USP13Q92995 863 aaPredicted RBP8.93□□□□□ -0.98
U2AF1-212ENST00000496462 PBKQ96KB5 322 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 DESI2Q9BSY9 194 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 VPS28Q9UK41 221 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 NUDT5Q9UKK9 219 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 HYOU1Q9Y4L1 999 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 APOL1O14791 398 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 HCRTO43612 131 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 CYP1A2P05177 515 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 GJA1P17302 382 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 DNAJB1P25685 340 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 SLC12A1Q13621 1099 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ZNF235Q14590 738 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 MSANTD2Q6P1R3 559 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 CD300LGQ6UXG3 332 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 RSAD2Q8WXG1 361 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 SUSD6Q92537 303 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ELSPBP1Q96BH3 223 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ASB2Q96Q27 587 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 VN1R3Q9BXE9 311 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 SLC2A11Q9BYW1 496 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 ZYG11BQ9C0D3 744 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 USP18Q9UMW8 372 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 SORCS3Q9UPU3 1222 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 NAALADL1Q9UQQ1 740 aa8.93□□□□□ -0.98
U2AF1-212ENST00000496462 E7EVH7 732 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 CHADO15335 359 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 CEP104O60308 925 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 CEBPBP17676 345 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 GABRB2P47870 512 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 RENBPP51606 427 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 NTHL1P78549 312 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 SARNPP82979 210 aaKnown RBP8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ADGRF1Q5T601 910 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 PLEKHA7Q6IQ23 1121 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 TIGD7Q6NT04 549 aaPredicted RBP8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ZNF852Q6ZMS4 543 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 TPGS1Q6ZTW0 290 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 APTXQ7Z2E3 356 aaKnown RBP8.92□□□□□ -0.98
U2AF1-212ENST00000496462 EMC1Q8N766 993 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ACRBPQ8NEB7 543 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 CXorf38Q8TB03 319 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 AZIN2Q96A70 460 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 BRD8Q9H0E9 1235 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 BCCIPQ9P287 314 aaKnown RBP eCLIP8.92□□□□□ -0.98
U2AF1-212ENST00000496462 RNF14Q9UBS8 474 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 SUN2Q9UH99 717 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 FAM170AA1A519 330 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 NPC1O15118 1278 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ADH5P11766 374 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ATF6P18850 670 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 MAMLD1Q13495 774 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 DGKKQ5KSL6 1271 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ZSCAN30Q86W11 494 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 CDKL3Q8IVW4 592 aaPredicted RBP8.92□□□□□ -0.98
U2AF1-212ENST00000496462 MFSD6LQ8IWD5 586 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ATPAF2Q8N5M1 289 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 TTYH3Q9C0H2 523 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ACP6Q9NPH0 428 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ARHGEF4Q9NR80 690 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 DNAJC17Q9NVM6 304 aaKnown RBP8.92□□□□□ -0.98
U2AF1-212ENST00000496462 SFMBT1Q9UHJ3 866 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 JRKLQ9Y4A0 524 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 COCHO43405 550 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 RAMP2O60895 175 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 TBL1XO60907 577 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 F11P03951 625 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 PDK1Q15118 436 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 LRRC38Q5VT99 294 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 CEP128Q6ZU80 1094 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 MON1BQ7L1V2 547 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 HOOK3Q86VS8 718 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 NPAS3Q8IXF0 933 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 CCDC89Q8N998 374 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 P3H4Q92791 437 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 HAPLN3Q96S86 360 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 KXD1Q9BQD3 176 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 CCSER2Q9H7U1 834 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 RAB23Q9ULC3 237 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 ADGRG1Q9Y653 693 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 USP3Q9Y6I4 520 aa8.92□□□□□ -0.98
U2AF1-212ENST00000496462 A0A1B0GVM2 712 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 TCAF2A6NFQ2 919 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 KCNU1A8MYU2 1149 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 LINC01565O15544 149 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 TSPAN3O60637 253 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 UNGP13051 313 aaPredicted RBP8.91□□□□□ -0.98
U2AF1-212ENST00000496462 GLULP15104 373 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 TACR2P21452 398 aa8.91□□□□□ -0.98
U2AF1-212ENST00000496462 DGKGP49619 791 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms