RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 PIRO00625 290 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 NRP1O14786 923 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 ERVK-10P10266 1014 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 SLC8A1P32418 973 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 SLC8A3P57103 927 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 MRPS5P82675 430 aaKnown RBP11.9□□□□□ -0.5
CDCA7-208ENST00000496441 DPYSL2Q16555 572 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 KIAA0319Q5VV43 1072 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 APBB1IPQ7Z5R6 666 aaPredicted RBP11.9□□□□□ -0.5
CDCA7-208ENST00000496441 CCDC91Q7Z6B0 441 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 NT5DC4Q86YG4 428 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 TTC39CQ8N584 583 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 TTC8Q8TAM2 541 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 P2RY11Q96G91 374 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 NCAPGQ9BPX3 1015 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 PRDM12Q9H4Q4 367 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 DDX43Q9NXZ2 648 aaKnown RBP11.9□□□□□ -0.5
CDCA7-208ENST00000496441 CNTN3Q9P232 1028 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 NKX1-2Q9UD57 310 aaPredicted RBP11.9□□□□□ -0.5
CDCA7-208ENST00000496441 NCAM1P13591 858 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 SAT1P21673 171 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 KCNA4P22459 653 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 MATKP42679 507 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 CACNA2D1P54289 1103 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 SNX16P57768 344 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 DEUP1Q05D60 604 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 BST1Q10588 318 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 SWT1Q5T5J6 900 aaKnown RBP11.9□□□□□ -0.5
CDCA7-208ENST00000496441 CES4AQ5XG92 561 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 GPRIN1Q7Z2K8 1008 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 UNC93AQ86WB7 457 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 NUDCD3Q8IVD9 361 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 AGR3Q8TD06 166 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 RNF139Q8WU17 664 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 TEKT4Q8WW24 435 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 SLC7A6OSQ96CW6 309 aaPredicted RBP11.9□□□□□ -0.5
CDCA7-208ENST00000496441 EBNA1BP2Q99848 306 aaKnown RBP11.9□□□□□ -0.5
CDCA7-208ENST00000496441 VPS11Q9H270 941 aa11.9□□□□□ -0.5
CDCA7-208ENST00000496441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.9□□□□□ -0.51
CDCA7-208ENST00000496441 MYBPHLA2RUH7 354 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 YJEFN3A6XGL0 299 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 E7ENQ6 273 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 DPYSL4O14531 572 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 LYPLA1O75608 230 aaPredicted RBP11.9□□□□□ -0.51
CDCA7-208ENST00000496441 F2P00734 622 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 CD4P01730 458 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 CCNB1P14635 433 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 ETV4P43268 484 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 PSEN2P49810 448 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 PPM1JQ5JR12 505 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 RFWD3Q6PCD5 774 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 ALKAL1Q6UXT8 129 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 KDELC2Q7Z4H8 507 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 SMG8Q8ND04 991 aaKnown RBP11.9□□□□□ -0.51
CDCA7-208ENST00000496441 ALKBH8Q96BT7 664 aaKnown RBP11.9□□□□□ -0.51
CDCA7-208ENST00000496441 ZNF560Q96MR9 790 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 RILPQ96NA2 401 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 ULBP1Q9BZM6 244 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 C20orf27Q9GZN8 174 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 ANLNQ9NQW6 1124 aa11.9□□□□□ -0.51
CDCA7-208ENST00000496441 HMX2A2RU54 273 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 RFPL1O75677 317 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 KRT38O76015 456 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 HAUS5O94927 633 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 TPH1P17752 444 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 PTPN1P18031 435 aaKnown RBP11.89□□□□□ -0.51
CDCA7-208ENST00000496441 CLCNKBP51801 687 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 NEK3P51956 506 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 PDE1BQ01064 536 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 NBPF20Q3BBV1 942 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 PREPLQ4J6C6 727 aaPredicted RBP11.89□□□□□ -0.51
CDCA7-208ENST00000496441 UBXN11Q5T124 520 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 DNAAF3Q8N9W5 541 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 STKLD1Q8NE28 680 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 FAM13CQ8NE31 585 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 GSDMBQ8TAX9 411 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 USP33Q8TEY7 942 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 AZIN2Q96A70 460 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 FAXDC2Q96IV6 333 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 CELF6Q96J87 481 aaKnown RBP11.89□□□□□ -0.51
CDCA7-208ENST00000496441 TNIP3Q96KP6 325 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 PARK7Q99497 189 aaKnown RBP11.89□□□□□ -0.51
CDCA7-208ENST00000496441 SHCBP1LQ9BZQ2 653 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 PPCSQ9HAB8 311 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 TMEM30AQ9NV96 361 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 ZNF358Q9NW07 568 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 KLHL8Q9P2G9 620 aaPredicted RBP11.89□□□□□ -0.51
CDCA7-208ENST00000496441 NUDT5Q9UKK9 219 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 MYADML2A6NDP7 307 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 EEF2KO00418 725 aaKnown RBP11.89□□□□□ -0.51
CDCA7-208ENST00000496441 PTGESO14684 152 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 ATP9BO43861 1147 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 STAU1O95793 577 aaKnown RBP11.89□□□□□ -0.51
CDCA7-208ENST00000496441 SETSIPP0DME0 302 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 SRGAP2BP0DMP2 458 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 GM2AP17900 193 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 PTPN9P43378 593 aa11.89□□□□□ -0.51
CDCA7-208ENST00000496441 ALDH18A1P54886 795 aaKnown RBP11.89□□□□□ -0.51
CDCA7-208ENST00000496441 RPL10AP62906 217 aaKnown RBP11.89□□□□□ -0.51
CDCA7-208ENST00000496441 KDSRQ06136 332 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms