RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 ZBTB24O43167 697 aaPredicted RBP17.02■□□□□ 0.32
SF3A1-209ENST00000496189 ACSL4O60488 711 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 DAB1O75553 588 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 GRAP2O75791 330 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 MOCS2O96007 188 aaPredicted RBP17.02■□□□□ 0.32
SF3A1-209ENST00000496189 PENKP01210 267 aaPredicted RBP17.02■□□□□ 0.32
SF3A1-209ENST00000496189 ABCB4P21439 1286 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 GABRB2P47870 512 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 RNASE9P60153 205 aaKnown RBP17.02■□□□□ 0.32
SF3A1-209ENST00000496189 NOMO3P69849 1222 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 SYPL2Q5VXT5 272 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 PPP1R2P3Q6NXS1 205 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 SYT13Q7L8C5 426 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 TAC4Q86UU9 113 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 FAM217AQ8IXS0 508 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 DEFB106AQ8N104 65 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 CAMKK1Q8N5S9 505 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 ADAM32Q8TC27 787 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 SLC20A1Q8WUM9 679 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 UCMAQ8WVF2 138 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 CPA5Q8WXQ8 436 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 SLC2A13Q96QE2 648 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 SLC2A11Q9BYW1 496 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 TTYH3Q9C0H2 523 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.02■□□□□ 0.32
SF3A1-209ENST00000496189 DDIT4Q9NX09 232 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.02■□□□□ 0.32
SF3A1-209ENST00000496189 AIPL1Q9NZN9 384 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 STOML2Q9UJZ1 356 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 CAPN11Q9UMQ6 739 aa17.02■□□□□ 0.32
SF3A1-209ENST00000496189 WDFY4Q6ZS81 3184 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 SYNJ2BP-COX16A0A087WUM0 186 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 A0A0A0MRY4 1105 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 TSPAN3O60637 253 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 IGLV3-27P01718 113 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 FYNP06241 537 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 CCR1P32246 355 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 NOS2P35228 1153 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 TIE1P35590 1138 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 MATKP42679 507 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 ZBED6P86452 979 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 FMO1Q01740 532 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 DMC1Q14565 340 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 EOGTQ5NDL2 527 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 FYB2Q5VWT5 728 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 GAS2L3Q86XJ1 694 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 ZNF513Q8N8E2 541 aaPredicted RBP17.01■□□□□ 0.31
SF3A1-209ENST00000496189 USP33Q8TEY7 942 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 CPLX3Q8WVH0 158 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 SYN2Q92777 582 aaPredicted RBP17.01■□□□□ 0.31
SF3A1-209ENST00000496189 BTN2A3PQ96KV6 586 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 COX16Q9P0S2 106 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 RAB23Q9ULC3 237 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 BZW2Q9Y6E2 419 aaKnown RBP17.01■□□□□ 0.31
SF3A1-209ENST00000496189 R4GN57 208 aa17.01■□□□□ 0.31
SF3A1-209ENST00000496189 PROB1E7EW31 1015 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 GOLGA8SH3BPF8 625 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 ALDH1A2O94788 518 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 F9P00740 461 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 CALB1P05937 261 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 DESP17661 470 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 HOXA6P31267 233 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 CNR2P34972 360 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 TAF5Q15542 800 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 TSR1Q2NL82 804 aaKnown RBP17■□□□□ 0.31
SF3A1-209ENST00000496189 HEATR6Q6AI08 1181 aaKnown RBP17■□□□□ 0.31
SF3A1-209ENST00000496189 IRF2BP2Q7Z5L9 587 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 ANKS1BQ7Z6G8 1248 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 LONP2Q86WA8 852 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 XYLT1Q86Y38 959 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 VSTM4Q8IW00 320 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 HJURPQ8NCD3 748 aaPredicted RBP17■□□□□ 0.31
SF3A1-209ENST00000496189 TSTD1Q8NFU3 115 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 PIWIL1Q96J94 861 aaKnown RBP17■□□□□ 0.31
SF3A1-209ENST00000496189 FCRL2Q96LA5 508 aaPredicted RBP17■□□□□ 0.31
SF3A1-209ENST00000496189 AGPAT1Q99943 283 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 POLMQ9NP87 494 aaPredicted RBP17■□□□□ 0.31
SF3A1-209ENST00000496189 MMP17Q9ULZ9 603 aa17■□□□□ 0.31
SF3A1-209ENST00000496189 KIAA1549LQ6ZVL6 1849 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 ANKRD62A6NC57 917 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 M0QYT0 321 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 KLF8O95600 359 aaPredicted RBP16.99■□□□□ 0.31
SF3A1-209ENST00000496189 APBB3O95704 486 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 LMNAP02545 664 aaKnown RBP16.99■□□□□ 0.31
SF3A1-209ENST00000496189 CYP1A1P04798 512 aaPredicted RBP16.99■□□□□ 0.31
SF3A1-209ENST00000496189 TNFAIP3P21580 790 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 SULT1E1P49888 294 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 DGKEP52429 567 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 KLHL30Q0D2K2 578 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 NME3Q13232 169 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 ZC3H12AQ5D1E8 599 aaKnown RBP16.99■□□□□ 0.31
SF3A1-209ENST00000496189 MPP7Q5T2T1 576 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 PKN3Q6P5Z2 889 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 MMS22LQ6ZRQ5 1243 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 CHSY1Q86X52 802 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 PHTF2Q8N3S3 785 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 CCDC33Q8N5R6 958 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 TXNDC5Q8NBS9 432 aaKnown RBP16.99■□□□□ 0.31
SF3A1-209ENST00000496189 ZBTB44Q8NCP5 570 aa16.99■□□□□ 0.31
SF3A1-209ENST00000496189 EZH1Q92800 747 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms