RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-233ENST00000496030 BNIPLQ7Z465 357 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 TAC4Q86UU9 113 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 ADGRG2Q8IZP9 1017 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 MSANTD4Q8NCY6 345 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 C3orf20Q8ND61 904 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 JOSD2Q8TAC2 188 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 ADAM32Q8TC27 787 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 SLC39A13Q96H72 371 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 PANX2Q96RD6 677 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 NPY6RQ99463 290 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.4□□□□□ -0.42
APTX-233ENST00000496030 DDX23Q9BUQ8 820 aaKnown RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 NACA2Q9H009 215 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 NHEJ1Q9H9Q4 299 aaPredicted RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 TRPV5Q9NQA5 729 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 WDR35Q9P2L0 1181 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 FBXO4Q9UKT5 387 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 HBS1LQ9Y450 684 aaKnown RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 PCDHGA2Q9Y5H1 932 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 WNT6Q9Y6F9 365 aa12.4□□□□□ -0.42
APTX-233ENST00000496030 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.4□□□□□ -0.42
APTX-233ENST00000496030 C2CD4BA6NLJ0 364 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 SIGLEC16A6NMB1 481 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 TRUB2O95900 331 aaKnown RBP12.39□□□□□ -0.43
APTX-233ENST00000496030 HMBSP08397 361 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 IRF1P10914 325 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 ARSAP15289 507 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 NOS2P35228 1153 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 MAMLD1Q13495 774 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 SLC18A3Q16572 532 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 TSR1Q2NL82 804 aaKnown RBP12.39□□□□□ -0.43
APTX-233ENST00000496030 EML3Q32P44 896 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 TRIM68Q6AZZ1 485 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 ALKBH5Q6P6C2 394 aaKnown RBP12.39□□□□□ -0.43
APTX-233ENST00000496030 DDX42Q86XP3 938 aaKnown RBP eCLIP12.39□□□□□ -0.43
APTX-233ENST00000496030 TMEM139Q8IV31 216 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 BBS7Q8IWZ6 715 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 EMC1Q8N766 993 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 SPC24Q8NBT2 197 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 OSCP1Q8WVF1 389 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 ATRIPQ8WXE1 791 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 GOLGA1Q92805 767 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 NELL1Q92832 810 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 CHFRQ96EP1 664 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 P2RY11Q96G91 374 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 FCRL2Q96LA5 508 aaPredicted RBP12.39□□□□□ -0.43
APTX-233ENST00000496030 TRIM62Q9BVG3 475 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 BRD9Q9H8M2 597 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 METTL5Q9NRN9 209 aaKnown RBP12.39□□□□□ -0.43
APTX-233ENST00000496030 ZNHIT6Q9NWK9 470 aaKnown RBP12.39□□□□□ -0.43
APTX-233ENST00000496030 THG1LQ9NWX6 298 aaKnown RBP12.39□□□□□ -0.43
APTX-233ENST00000496030 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.39□□□□□ -0.43
APTX-233ENST00000496030 IMPACTQ9P2X3 320 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 STRIP2Q9ULQ0 834 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 TICRRQ7Z2Z1 1910 aa12.39□□□□□ -0.43
APTX-233ENST00000496030 GFRA2O00451 464 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 CAPN9O14815 690 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 IRAK2O43187 625 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 ATMINO43313 823 aaPredicted RBP12.38□□□□□ -0.43
APTX-233ENST00000496030 ENDOD1O94919 500 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 KRT3P12035 628 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 RPL7AP62424 266 aaKnown RBP12.38□□□□□ -0.43
APTX-233ENST00000496030 OGDHQ02218 1023 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 RING1Q06587 406 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 SPEM2Q0P670 501 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 NNTQ13423 1086 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 PDGFRLQ15198 375 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 GAB4Q2WGN9 574 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 CCDC14Q49A88 953 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 RAB6CQ53S08 254 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 CCDC122Q5T0U0 273 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 PPP1R2P3Q6NXS1 205 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 VPS36Q86VN1 386 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 TTC16Q8NEE8 873 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 RXFP2Q8WXD0 754 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 CENPIQ92674 756 aaPredicted RBP12.38□□□□□ -0.43
APTX-233ENST00000496030 IRF7Q92985 503 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 PLD4Q96BZ4 506 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 TBCBQ99426 244 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 RAB6CQ9H0N0 254 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 EBF3Q9H4W6 596 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 SPTLC3Q9NUV7 552 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 ZSCAN32Q9NX65 697 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 DUS2Q9NX74 493 aaKnown RBP12.38□□□□□ -0.43
APTX-233ENST00000496030 GTSE1Q9NYZ3 720 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 STOML2Q9UJZ1 356 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 AGO1Q9UL18 857 aaKnown RBP12.38□□□□□ -0.43
APTX-233ENST00000496030 TLR6Q9Y2C9 796 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 RALGAPA1Q6GYQ0 2036 aa12.38□□□□□ -0.43
APTX-233ENST00000496030 KANSL1LA0AUZ9 987 aa12.37□□□□□ -0.43
APTX-233ENST00000496030 TMEM191CA6NGB0 347 aa12.37□□□□□ -0.43
APTX-233ENST00000496030 KCNU1A8MYU2 1149 aa12.37□□□□□ -0.43
APTX-233ENST00000496030 I6L893 689 aaPredicted RBP12.37□□□□□ -0.43
APTX-233ENST00000496030 SLC30A4O14863 429 aa12.37□□□□□ -0.43
APTX-233ENST00000496030 LCA5LO95447 670 aa12.37□□□□□ -0.43
APTX-233ENST00000496030 CD72P21854 359 aa12.37□□□□□ -0.43
APTX-233ENST00000496030 CORO1AP31146 461 aaKnown RBP12.37□□□□□ -0.43
APTX-233ENST00000496030 CXCR3P49682 368 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms