RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ANKRD17O75179 2603 aaKnown RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 A0A087WV62 115 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 A0A0A6YYJ9 748 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 ERICH2A1L162 156 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 LRRC10BA6NIK2 292 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 RHPN2P1A8MT19 583 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 HMGB1P1B2RPK0 211 aaPredicted RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 FAM86B1E9PN63 330 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 FGF18O76093 207 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 IGLV1-40P01703 118 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 IGHA1P01876 353 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 LRG1P02750 347 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 FTLP02792 175 aaPredicted RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 ITGB2P05107 769 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 RPLP2P05387 115 aaKnown RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 FAM86B2P0C5J1 330 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 INSRRP14616 1297 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 FOSL1P15407 271 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 KIF5BP33176 963 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 SREBF1P36956 1147 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 PBX3P40426 434 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 GRK6P43250 576 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 NKX6-1P78426 367 aaPredicted RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 ROM1Q03395 351 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 PRKCQQ04759 706 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 CSTF1Q05048 431 aaKnown RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 BTKQ06187 659 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 TMEM62Q0P6H9 643 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 TRDNQ13061 729 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 TMEM266Q2M3C6 531 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 FAM209BQ5JX69 171 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 IZUMO3Q5VZ72 239 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 CD276Q5ZPR3 534 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 CCDC70Q6NSX1 233 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 GALNT18Q6P9A2 607 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 KLHDC10Q6PID8 442 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 ZC3H14Q6PJT7 736 aaKnown RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 HEATR3Q7Z4Q2 680 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 MILR1Q7Z6M3 343 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 NLRX1Q86UT6 975 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 FAM228AQ86W67 206 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 MICU3Q86XE3 530 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 ZNF354CQ86Y25 554 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 MYLK4Q86YV6 388 aaPredicted RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 ANKS4BQ8N8V4 417 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 TDRD5Q8NAT2 981 aaKnown RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 COLGALT1Q8NBJ5 622 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 GLB1L3Q8NCI6 653 aaPredicted RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 FATE1Q969F0 183 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 PPP2R3CQ969Q6 453 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 RGMAQ96B86 450 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 CDHR1Q96JP9 859 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 HNRNPABQ99729 332 aaKnown RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 FTHL17Q9BXU8 183 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 RWDD1Q9H446 243 aaPredicted RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 SMARCAD1Q9H4L7 1026 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 AGO4Q9HCK5 861 aaKnown RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 SLAMF8Q9P0V8 285 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 SLC9A2Q9UBY0 812 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 SEC63Q9UGP8 760 aaKnown RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 FBXO9Q9UK97 447 aaPredicted RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 PADI3Q9ULW8 664 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 PCDHA6Q9UN73 950 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 PCDHA13Q9Y5I0 950 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 HCFC2Q9Y5Z7 792 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 CFAP20Q9Y6A4 193 aaKnown RBP4.72□□□□□ -1.65
VPS52-222ENST00000495981 RPS6KL1Q9Y6S9 549 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 TEX15Q9BXT5 2789 aa4.72□□□□□ -1.65
VPS52-222ENST00000495981 ABCA12Q86UK0 2595 aa4.71□□□□□ -1.65
VPS52-222ENST00000495981 DNHD1Q96M86 4753 aa4.71□□□□□ -1.65
VPS52-222ENST00000495981 APC2O95996 2303 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 CACNA1EQ15878 2313 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 A0A0A6YYK5 440 aaPredicted RBP4.71□□□□□ -1.66
VPS52-222ENST00000495981 SMIM35A0A1B0GVV1 85 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 RRN3P2A6NIE6 340 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 F8W8V4 182 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 MYO1FO00160 1098 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 MSTNO14793 375 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 PSPNO60542 156 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 TMEM127O75204 238 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 SEC24DO94855 1032 aaPredicted RBP4.71□□□□□ -1.66
VPS52-222ENST00000495981 PRB1P04280 392 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 DBHP09172 617 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 EPCAMP16422 314 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 HOXB8P17481 243 aaPredicted RBP4.71□□□□□ -1.66
VPS52-222ENST00000495981 FSTP19883 344 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 LIFRP42702 1097 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 SLC6A9P48067 706 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 SLC26A2P50443 739 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 HK3P52790 923 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 UBE3AQ05086 875 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 MGAT2Q10469 447 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 SRSF5Q13243 272 aaKnown RBP4.71□□□□□ -1.66
VPS52-222ENST00000495981 IKZF1Q13422 519 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 CLLU1OSQ5K130 101 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 BICRALQ6AI39 1079 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 MTHFD1LQ6UB35 978 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 PRR23BQ6ZRT6 265 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 NIPA1Q7RTP0 329 aa4.71□□□□□ -1.66
VPS52-222ENST00000495981 PLPPR4Q7Z2D5 763 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms