RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, human

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM28-208	ENST00000495327	PIWIL1	Q96J94	861 aa	Known RBP	13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	PPP1R13B	Q96KQ4	1090 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	FCRL2	Q96LA5	508 aa	Predicted RBP	13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	CPXM1	Q96SM3	734 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	TPSD1	Q9BZJ3	242 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	GAN	Q9H2C0	597 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	CD248	Q9HCU0	757 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	PARD6A	Q9NPB6	346 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	ZDHHC4	Q9NPG8	344 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	FANCL	Q9NW38	375 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	ASNSD1	Q9NWL6	643 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	TJP2	Q9UDY2	1190 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	NAALADL1	Q9UQQ1	740 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	CEP83	Q9Y592	693 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327	CACNA1A	O00555	2505 aa		13.88	□□□□□ -0.19
RBM28-208	ENST00000495327		F8VZ95	297 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	CAPN9	O14815	690 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	ACSL4	O60488	711 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	CDH5	P33151	784 aa	Predicted RBP	13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	KRT9	P35527	623 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	SLC11A2	P49281	568 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	YWHAZ	P63104	245 aa	Known RBP	13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	LMNB2	Q03252	620 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	GEN1	Q17RS7	908 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	PLK5	Q496M5	336 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	USP39	Q53GS9	565 aa	Known RBP	13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	FAM133B	Q5BKY9	247 aa	Known RBP	13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	MPP7	Q5T2T1	576 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	SYPL2	Q5VXT5	272 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	TAC4	Q86UU9	113 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	CHPF	Q8IZ52	775 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	STK33	Q9BYT3	514 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	VPS16	Q9H269	839 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	TMEM63C	Q9P1W3	806 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	LIMA1	Q9UHB6	759 aa	Known RBP	13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	PCDHGA5	Q9Y5G8	931 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327	ABCA7	Q8IZY2	2146 aa		13.87	□□□□□ -0.19
RBM28-208	ENST00000495327		A0A1W2PQF6	199 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	TCRBV21S2A2	A0A5A6	115 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	FOXD2	O60548	495 aa	Predicted RBP	13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	HSF2BP	O75031	334 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	CYP11B1	P15538	503 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	ZNF18	P17022	549 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	P2RY2	P41231	377 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	COPB1	P53618	953 aa	Known RBP	13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	SNX16	P57768	344 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	TYRO3	Q06418	890 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	SPEM2	Q0P670	501 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	ENPP2	Q13822	863 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	NCAPH	Q15003	741 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	ELF2	Q15723	593 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	PTPN20	Q4JDL3	420 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	EFHC1	Q5JVL4	640 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	FKBP15	Q5T1M5	1219 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	PIK3R6	Q5UE93	754 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	PMS2CL	Q68D20	193 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	SDE2	Q6IQ49	451 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	OLFML1	Q6UWY5	402 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	FAM183BP	Q6ZVS7	135 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	ZNF557	Q8N988	423 aa	Predicted RBP	13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	ANKRD20A12P	Q8NF67	263 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	EPS8L1	Q8TE68	723 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	WFIKKN2	Q8TEU8	576 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	IPO4	Q8TEX9	1081 aa	Known RBP	13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	DDX1	Q92499	740 aa	Known RBP	13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	SLC2A13	Q96QE2	648 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	ACOX2	Q99424	681 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	DDX50	Q9BQ39	737 aa	Known RBP	13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	SEMA4G	Q9NTN9	838 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	CLEC4E	Q9ULY5	219 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	USP18	Q9UMW8	372 aa		13.86	□□□□□ -0.19
RBM28-208	ENST00000495327	LGALS16	A8MUM7	142 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	PRR5-ARHGAP8	B1AHC4	643 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	TSPAN3	O60637	253 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	RHOBTB1	O94844	696 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	TRUB2	O95900	331 aa	Known RBP	13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	APOE	P02649	317 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	ERBB2	P04626	1255 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	GABRG2	P18507	467 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	HLA-F	P30511	346 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	SLC6A4	P31645	630 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	ID4	P47928	161 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	SGSH	P51688	502 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	ARHGAP8	P85298	464 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	CSRP2	Q16527	193 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	NADSYN1	Q6IA69	706 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	SLC26A9	Q7LBE3	791 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	ZNF677	Q86XU0	584 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	ZDHHC17	Q8IUH5	632 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	HJURP	Q8NCD3	748 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	TMEM35B	Q8NCS4	154 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	ZNF397	Q8NF99	534 aa	Predicted RBP	13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	ADAM32	Q8TC27	787 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	UCMA	Q8WVF2	138 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	HMGB4	Q8WW32	186 aa		13.85	□□□□□ -0.19
RBM28-208	ENST00000495327	TMA16	Q96EY4	203 aa	Known RBP	13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms