RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SLC5A3P53794 718 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 BIRC3Q13489 604 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 MAPRE1Q15691 268 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 SCARA5Q6ZMJ2 495 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 PDZD3Q86UT5 571 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 CHPFQ8IZ52 775 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 FBXL13Q8NEE6 735 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 PLEKHO2Q8TD55 490 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 IPO4Q8TEX9 1081 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 TRIM44Q96DX7 344 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 DNAJC17Q9NVM6 304 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 OSER1Q9NX31 292 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 PLK2Q9NYY3 685 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 RAXQ9Y2V3 346 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 SLCO1B1Q9Y6L6 691 aa12.35□□□□□ -0.43
CSNK1E-212ENST00000494610 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 TEX33O43247 280 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 PHACTR2O75167 634 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 TACC1O75410 805 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 CCDC130P13994 396 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 PIK3CAP42336 1068 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 GRIK2Q13002 908 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 TSR1Q2NL82 804 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 HSF5Q4G112 596 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 SPDYCQ5MJ68 293 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 HECTD3Q5T447 861 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 BTBD8Q5XKL5 378 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 GRAMD4Q6IC98 578 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 KIAA1324Q6UXG2 1013 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 GPRIN1Q7Z2K8 1008 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 FAM35AQ86V20 835 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 CACUL1Q86Y37 369 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 NAXDQ8IW45 347 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 B3GALNT2Q8NCR0 500 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 ZMIZ2Q8NF64 920 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 CEP76Q8TAP6 659 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 MRGPRX1Q96LB2 322 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 MED10Q9BTT4 135 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 ELOVL4Q9GZR5 314 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 XYLT2Q9H1B5 865 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.34□□□□□ -0.433e-6■■■■■ 28.8
CSNK1E-212ENST00000494610 DNAAF2Q9NVR5 837 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 TBC1D14Q9P2M4 693 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 HMGXB4Q9UGU5 601 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 MYO6Q9UM54 1294 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 COQ4Q9Y3A0 265 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 GOLGA4Q13439 2230 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 MYH10P35580 1976 aa12.34□□□□□ -0.43
CSNK1E-212ENST00000494610 CFAP46Q8IYW2 2715 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 TENM4Q6N022 2769 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 GOLGA8CPA6NN73 597 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 AKR1B15C9JRZ8 316 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 TYRP14679 529 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 DEKP35659 375 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 PPP3CCP48454 512 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 GCLMP48507 274 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 TNNC1P63316 161 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 BNC1Q01954 994 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 TRPC3Q13507 836 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 BYSLQ13895 437 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 NUMA1Q14980 2115 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 ZACNQ401N2 412 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 HS1BP3Q53T59 392 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 TRIM65Q6PJ69 517 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 SLC36A4Q6YBV0 504 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 ACOT1Q86TX2 421 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 ZCCHC9Q8N567 271 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 SPC24Q8NBT2 197 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 CCDC112Q8NEF3 446 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 TAF4BQ92750 862 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 JAKMIP2Q96AA8 810 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 ZNF419Q96HQ0 510 aaPredicted RBP12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 FAXDC2Q96IV6 333 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 NT5C1BQ96P26 610 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 SMOQ99835 787 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 BBS2Q9BXC9 721 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 MMRN2Q9H8L6 949 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 SIK3Q9Y2K2 1263 aa12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 LUC7L2Q9Y383 392 aaKnown RBP12.33□□□□□ -0.44
CSNK1E-212ENST00000494610 H0Y626 953 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 CBFA2T3O75081 653 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 AP1G2O75843 785 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 TRIM16O95361 564 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 CISD3P0C7P0 127 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 ZDHHC11BP0C7U3 371 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 CCDC172P0C7W6 258 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 HOXD12P35452 270 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 MAP3K7CLP57077 242 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 DLG4P78352 724 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 PPP3CAQ08209 521 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 ZNF423Q2M1K9 1284 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 CBWD6Q4V339 395 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 CBWD3Q5JTY5 395 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 CBWD5Q5RIA9 395 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 CCNI2Q6ZMN8 369 aaPredicted RBP12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 SV2AQ7L0J3 742 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 ENOSF1Q7L5Y1 443 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 DDX42Q86XP3 938 aaKnown RBP eCLIP12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 FUKQ8N0W3 1084 aa12.32□□□□□ -0.44
CSNK1E-212ENST00000494610 C12orf29Q8N999 325 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms