RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SCINQ9Y6U3 715 aa2.72□□□□□ -1.97
LMNB1-207ENST00000494185 WDR17Q8IZU2 1322 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 PNMA6EA0A0J9YXQ4 647 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 LRRC3CA6NJW4 275 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 LGALS16A8MUM7 142 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 EFCAB8A8MWE9 144 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 H3BNC9 293 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 J3KTA2 159 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 SYT5O00445 386 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 ZNF213O14771 459 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 NPC1O15118 1278 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 CA12O43570 354 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 CBFA2T3O75081 653 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 RBMXL2O75526 392 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 HSP90AA1P07900 732 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 NPPBP16860 134 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 MCM5P33992 734 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 CHKAP35790 457 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 IGHMBP2P38935 993 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 PBX1P40424 430 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 PTH2RP49190 550 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 MCM2P49736 904 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 WDR5P61964 334 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 MTAPQ13126 283 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 FHL3Q13643 280 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 PTK2BQ14289 1009 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 SPARCL1Q14515 664 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 PFKFB4Q16877 469 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 TRIM71Q2Q1W2 868 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 ZACNQ401N2 412 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 SLC9C1Q4G0N8 1177 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 AASDHQ4L235 1098 aaPredicted RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 CCDC38Q502W7 563 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 RNASE12Q5GAN4 147 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 TMEM196Q5HYL7 178 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 ZNF569Q5MCW4 686 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 ZKSCAN2Q63HK3 967 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 TMEM88Q6PEY1 159 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 RANBP10Q6VN20 620 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 BCDIN3DQ7Z5W3 292 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 CLASRPQ8N2M8 674 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 FAM47BQ8NA70 645 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 FAM98AQ8NCA5 519 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 OR52L2PQ8NGH6 319 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 FAM71BQ8TC56 605 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 BCAS4Q8TDM0 211 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 RPL36ALQ969Q0 106 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 VOPP1Q96AW1 172 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 MACROD1Q9BQ69 325 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 SLC29A3Q9BZD2 475 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 NUAK2Q9H093 628 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 EPS8L2Q9H6S3 715 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 OBP2BQ9NPH6 170 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 TMLHEQ9NVH6 421 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 SAGE1Q9NXZ1 904 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 TUBA8Q9NY65 449 aaPredicted RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 MAP3K20Q9NYL2 800 aaKnown RBP2.71□□□□□ -1.98
LMNB1-207ENST00000494185 LRFN1Q9P244 771 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 IGSF9Q9P2J2 1179 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 ADAM21Q9UKJ8 722 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 GPR52Q9Y2T5 361 aa2.71□□□□□ -1.98
LMNB1-207ENST00000494185 POLR2AP24928 1970 aaKnown RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 A0A1B0GVC2 190 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 DPPA5A6NC42 116 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 AQP12BA6NM10 295 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 F8W810 466 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CLIC1O00299 241 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 PCDH17O14917 1159 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 INPPL1O15357 1258 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ASNA1O43681 348 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CCNT1O60563 726 aaKnown RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 C1QL1O75973 258 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 LARGE1O95461 756 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 NTSR2O95665 410 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ALDOAP04075 364 aaKnown RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CSTBP04080 98 aaKnown RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ANXA6P08133 673 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ITGA2BP08514 1039 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ITGA5P08648 1049 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 TMEM191BP0C7N4 346 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CYP2D6P10635 497 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 CYP2A6P11509 494 aaPredicted RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 TFEBP19484 476 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 SCP2P22307 547 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 PDIA3P30101 505 aaKnown RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ABCG1P45844 678 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 ID2Q02363 134 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 DEUP1Q05D60 604 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 LMOD3Q0VAK6 560 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 FOXO1Q12778 655 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 PPFIA1Q13136 1202 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 TBX2Q13207 712 aaPredicted RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 DNASE1L3Q13609 305 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 SIM2Q14190 667 aaPredicted RBP2.7□□□□□ -1.98
LMNB1-207ENST00000494185 KCNJ12Q14500 433 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 TBRG1Q3YBR2 411 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 MTX3Q5HYI7 312 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 WDR78Q5VTH9 848 aa2.7□□□□□ -1.98
LMNB1-207ENST00000494185 JAKMIP3Q5VZ66 844 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms