RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 BNIPLQ7Z465 357 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 OTUB2Q96DC9 234 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 ZFYVE19Q96K21 471 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 BTN2A3PQ96KV6 586 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 NCAPGQ9BPX3 1015 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 TKTL2Q9H0I9 626 aa15.12■□□□□ 0.01
BRCA1-223ENST00000494123 AGO1Q9UL18 857 aaKnown RBP15.12■□□□□ 0.01
BRCA1-223ENST00000494123 GREM1O60565 184 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 LATS1O95835 1130 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 ARHGAP25P42331 645 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 HDAC4P56524 1084 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 MESDQ14696 234 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 TCEAL1Q15170 157 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 RAB6CQ53S08 254 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 Q6ZNB5 142 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 RNF135Q8IUD6 432 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 IRF7Q92985 503 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 NECAB3Q96P71 396 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-223ENST00000494123 DDX50Q9BQ39 737 aaKnown RBP15.11■□□□□ 0.01
BRCA1-223ENST00000494123 TSGA10Q9BZW7 698 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 LACRTQ9GZZ8 138 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 RAB6CQ9H0N0 254 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 KIF26AQ9ULI4 1882 aaPredicted RBP15.11■□□□□ 0.01
BRCA1-223ENST00000494123 MYO10Q9HD67 2058 aa15.11■□□□□ 0.01
BRCA1-223ENST00000494123 BTNL10A8MVZ5 291 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 KCNU1A8MYU2 1149 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 BUB1O43683 1085 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 ACSL4O60488 711 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 PROSCO94903 275 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 CHKAP35790 457 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 SSR1P43307 286 aaKnown RBP15.1■□□□□ 0.01
BRCA1-223ENST00000494123 TRIM68Q6AZZ1 485 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 NIPA2Q8N8Q9 360 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 CSGALNACT1Q8TDX6 532 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 ATP2A3Q93084 1043 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 AZIN2Q96A70 460 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 ASIC4Q96FT7 647 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 CALR3Q96L12 384 aaKnown RBP15.1■□□□□ 0.01
BRCA1-223ENST00000494123 UHRF1Q96T88 793 aaPredicted RBP15.1■□□□□ 0.01
BRCA1-223ENST00000494123 LINC00597Q9H2U6 94 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 EBF3Q9H4W6 596 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 ARHGEF38Q9NXL2 777 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 SORCS3Q9UPU3 1222 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 MACROD2A1Z1Q3 448 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 KRT86O43790 486 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 PRPSAP2O60256 369 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 LRCH4O75427 683 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 PAGE1O75459 146 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 NFATC1O95644 943 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 HADHBP55084 474 aaKnown RBP15.1■□□□□ 0.01
BRCA1-223ENST00000494123 IFI16Q16666 785 aaKnown RBP15.1■□□□□ 0.01
BRCA1-223ENST00000494123 EML3Q32P44 896 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 ADGRF1Q5T601 910 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 CHSY1Q86X52 802 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 CPA6Q8N4T0 437 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 FAM83CQ9BQN1 747 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 PCSK1NQ9UHG2 260 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 PPP2R2CQ9Y2T4 447 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 DUSP10Q9Y6W6 482 aa15.1■□□□□ 0.01
BRCA1-223ENST00000494123 NARSO43776 548 aaKnown RBP15.09■□□□□ 0.01
BRCA1-223ENST00000494123 SRFP11831 508 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 ARSAP15289 507 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 MIPP30301 263 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 MAN1A1P33908 653 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 PCK1P35558 622 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 VCPP55072 806 aaKnown RBP15.09■□□□□ 0.01
BRCA1-223ENST00000494123 PFKPQ01813 784 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 TNK2Q07912 1038 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 NR1H3Q13133 447 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 HADHQ16836 314 aaKnown RBP15.09■□□□□ 0.01
BRCA1-223ENST00000494123 EFHC2Q5JST6 749 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 DAB2IPQ5VWQ8 1189 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 SLFN11Q7Z7L1 901 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 CCDC185Q8N715 623 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 NTAN1Q96AB6 310 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 SIK2Q9H0K1 926 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 TRIM10Q9UDY6 481 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 XPO7Q9UIA9 1087 aaKnown RBP15.09■□□□□ 0.01
BRCA1-223ENST00000494123 STOML2Q9UJZ1 356 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 DUSP12Q9UNI6 340 aa15.09■□□□□ 0.01
BRCA1-223ENST00000494123 TICRRQ7Z2Z1 1910 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 UNC80Q8N2C7 3258 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 A0A0U1RQJ8 604 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 GOLGA6L7A0A1B0GV03 622 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 TYW5A2RUC4 315 aaKnown RBP15.08■□□□□ 0
BRCA1-223ENST00000494123 ZSCAN12O43309 604 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 ADH1CP00326 375 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 CYBBP04839 570 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 ADRA1BP35368 520 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 AIF1P55008 147 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 RUNX3Q13761 415 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 ITPRIPL2Q3MIP1 535 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 ACBD5Q5T8D3 534 aaPredicted RBP15.08■□□□□ 0
BRCA1-223ENST00000494123 RAP1GAP2Q684P5 730 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 NADSYN1Q6IA69 706 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 TPGS1Q6ZTW0 290 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 DAAM2Q86T65 1068 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 ADGRG2Q8IZP9 1017 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 CPXM2Q8N436 756 aa15.08■□□□□ 0
BRCA1-223ENST00000494123 TTC8Q8TAM2 541 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms