RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 PARVGQ9HBI0 331 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 BAIAP2L1Q9UHR4 511 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 GIT1Q9Y2X7 761 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 HES2Q9Y543 173 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 IPPQ9Y573 584 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 THADAQ6YHU6 1953 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 SHROOM3Q8TF72 1996 aa11.07□□□□□ -0.64
PDLIM1-205ENST00000493949 NRG2O14511 850 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 ADAM12O43184 909 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 CDH16O75309 829 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 GCNT3O95395 438 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 SPATA31C1P0DKV0 1188 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 GDI1P31150 447 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 HOXC13P31276 330 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 SFNP31947 248 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 HOXD13P35453 343 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 RPL21P46778 160 aaKnown RBP11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 PLTPP55058 493 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 CENPCQ03188 943 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 PTK6Q13882 451 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 CTTNQ14247 550 aaKnown RBP11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 STAT4Q14765 748 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 XKR3Q5GH77 459 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 VITQ6UXI7 678 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 Q6ZS52 159 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 ASRGL1Q7L266 308 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 SPATA21Q7Z572 469 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 SLC13A5Q86YT5 568 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 PRELID2Q8N945 189 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 ADAM32Q8TC27 787 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 CD101Q93033 1021 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 KLHL29Q96CT2 875 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 SNF8Q96H20 258 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 EIF2AQ9BY44 585 aaKnown RBP11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 FGFBP2Q9BYJ0 223 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 C8orf33Q9H7E9 229 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 TMEM206Q9H813 350 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 TRPV4Q9HBA0 871 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 KLHL14Q9P2G3 628 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 GTF3C4Q9UKN8 822 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 VAV3Q9UKW4 847 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 CORO1CQ9ULV4 474 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 ALG6Q9Y672 507 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 UNC79Q9P2D8 2635 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 CELSR3Q9NYQ7 3312 aa11.06□□□□□ -0.64
PDLIM1-205ENST00000493949 LNP1A1A4G5 178 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 ARHGEF37A1IGU5 675 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 TGFB1I1O43294 461 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 HYAL3O43820 417 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 TADA2AO75478 443 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 DCTN3O75935 186 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 CYP1A2P05177 515 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 MYBL1P10243 752 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 RARAP10276 462 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 PTPN2P17706 415 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 AXLP30530 894 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 SLC1A1P43005 524 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 PEX5P50542 639 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 CASP5P51878 434 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 JAK3P52333 1124 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 RWDD2BP57060 319 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 BFSP1Q12934 665 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 GRIK3Q13003 919 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 PPP2R5CQ13362 524 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 CCINQ13939 588 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 PCBP1Q15365 356 aaKnown RBP eCLIP11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 PLK5Q496M5 336 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 RHBDF2Q6PJF5 856 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 ENOSF1Q7L5Y1 443 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 USP37Q86T82 979 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 TDRPQ86YL5 185 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 MFSD6LQ8IWD5 586 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 NUP210Q8TEM1 1887 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 SLC5A5Q92911 643 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 CPB2Q96IY4 423 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 TTC25Q96NG3 672 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 PRMT1Q99873 361 aaKnown RBP11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 ELAC2Q9BQ52 826 aaKnown RBP11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 TUBB6Q9BUF5 446 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 APOL6Q9BWW8 343 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 GPR88Q9GZN0 384 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 DUSP15Q9H1R2 295 aaPredicted RBP11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 ST6GALNAC4Q9H4F1 302 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 ECT2Q9H8V3 914 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 SSU72Q9NP77 194 aaKnown RBP11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 NKIRAS1Q9NYS0 192 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 TBC1D7Q9P0N9 293 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 STARD13Q9Y3M8 1113 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 PLXNB3Q9ULL4 1909 aa11.05□□□□□ -0.64
PDLIM1-205ENST00000493949 BCLAF3A2AJT9 711 aaKnown RBP11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 WDR27A2RRH5 827 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 MYBPHLA2RUH7 354 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 CDX4O14627 284 aaPredicted RBP11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 GAS7O60861 476 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 ANP32DO95626 131 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 TTC4O95801 387 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 SRGAP2CP0DJJ0 459 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 ALDH3A1P30838 453 aa11.04□□□□□ -0.64
PDLIM1-205ENST00000493949 ABCD1P33897 745 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms