RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-222	ENST00000493792		Q6ZS52	159 aa		10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	TOGARAM2	Q6ZUX3	1019 aa		10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	FAM183BP	Q6ZVS7	135 aa		10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	FAM160A2	Q8N612	972 aa	Predicted RBP	10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	ADAM32	Q8TC27	787 aa		10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	CPA5	Q8WXQ8	436 aa		10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	RNF34	Q969K3	372 aa		10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	POPDC2	Q9HBU9	364 aa		10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	COX16	Q9P0S2	106 aa		10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	AGO1	Q9UL18	857 aa	Known RBP	10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	HBS1L	Q9Y450	684 aa	Known RBP	10.85	□□□□□ -0.67
TRAPPC12-222	ENST00000493792		A0A1W2PQC6	194 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	C1QTNF9B	B2RNN3	333 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	FOXD2	O60548	495 aa	Predicted RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	GREM1	O60565	184 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	TSPAN3	O60637	253 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	RNF40	O75150	1001 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	LSM8	O95777	96 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	MOCS2	O96007	188 aa	Predicted RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	KLKB1	P03952	638 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	CYBB	P04839	570 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	APOD	P05090	189 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	C1QTNF9	P0C862	333 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	DRD1	P21728	446 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	HOXA6	P31267	233 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	CHKA	P35790	457 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	SLC6A11	P48066	632 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	CDK17	Q00537	523 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	CDR2	Q01850	454 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	CCIN	Q13939	588 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	SF3A2	Q15428	464 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	TRIP4	Q15650	581 aa	Predicted RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	C2CD6	Q53TS8	623 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	SYPL2	Q5VXT5	272 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	MSANTD2	Q6P1R3	559 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792		Q6ZNB5	142 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	LONP2	Q86WA8	852 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	C12orf40	Q86WS4	652 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	ZNF677	Q86XU0	584 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	DEFB106A	Q8N104	65 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	SYNPO	Q8N3V7	929 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	KDF1	Q8NAX2	398 aa	Predicted RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	DQX1	Q8TE96	717 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	C18orf8	Q96DM3	657 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	PIWIL1	Q96J94	861 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	SERPINB11	Q96P15	392 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	XPO6	Q96QU8	1125 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	PNKP	Q96T60	521 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	FAM204A	Q9H8W3	233 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	ARHGEF4	Q9NR80	690 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	DNAJC17	Q9NVM6	304 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	PLK2	Q9NYY3	685 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	IFNK	Q9P0W0	207 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	WDR35	Q9P2L0	1181 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	DEC1	Q9P2X7	70 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	NOCT	Q9UK39	431 aa	Known RBP	10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	WASF3	Q9UPY6	502 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	CEP295	Q9C0D2	2601 aa		10.84	□□□□□ -0.67
TRAPPC12-222	ENST00000493792	TBC1D3B	A6NDS4	549 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	LRRC53	A6NM62	1247 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	HOXC11	O43248	304 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	HSF2BP	O75031	334 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	KAT7	O95251	611 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	KCNK5	O95279	499 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	APOE	P02649	317 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	FYN	P06241	537 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	TPM3	P06753	285 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	ZNF806	P0C7X5	589 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	TYR	P14679	529 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	FER	P16591	822 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	SLC11A2	P49281	568 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	NOMO3	P69849	1222 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	FMO1	Q01740	532 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	SLC6A3	Q01959	620 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	NME3	Q13232	169 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	NR1I3	Q14994	352 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	ASIC2	Q16515	512 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	FBXO43	Q4G163	708 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	C2orf27A	Q580R0	203 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	FAM102A	Q5T9C2	384 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	NUGGC	Q68CJ6	796 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	IL31	Q6EBC2	164 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	GRAMD4	Q6IC98	578 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	TRIM72	Q6ZMU5	477 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	PHLDB2	Q86SQ0	1253 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	TAC4	Q86UU9	113 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	UNC45B	Q8IWX7	931 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	SLC30A5	Q8TAD4	765 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	DDI1	Q8WTU0	396 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	CPLX3	Q8WVH0	158 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	C11orf70	Q9BRQ4	267 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	DDIT4	Q9NX09	232 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	ZMIZ1	Q9ULJ6	1067 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	MYOF	Q9NZM1	2061 aa		10.83	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	AXIN1	O15169	862 aa		10.82	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	TULP3	O75386	442 aa		10.82	□□□□□ -0.68
TRAPPC12-222	ENST00000493792	DAB1	O75553	588 aa		10.82	□□□□□ -0.68

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