RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 LARS2Q15031 903 aaKnown RBP3.86□□□□□ -1.79
PTCD3-218ENST00000493430 INSCQ1MX18 579 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 MIDNQ504T8 468 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 TMTC4Q5T4D3 741 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 VSTM1Q6UX27 236 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 RANBP10Q6VN20 620 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 DEF8Q6ZN54 512 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 C16orf71Q8IYS4 520 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-218ENST00000493430 DNAJB14Q8TBM8 379 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 ADAMTS15Q8TE58 950 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 CTHRC1Q96CG8 243 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 MARK4Q96L34 752 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 HS6ST2Q96MM7 605 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 NT5C1BQ96P26 610 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 TRIM5Q9C035 493 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 ZNF518BQ9C0D4 1074 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 A1CFQ9NQ94 594 aaKnown RBP3.86□□□□□ -1.79
PTCD3-218ENST00000493430 TMEM184CQ9NVA4 438 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 GABBR1Q9UBS5 961 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 PNMA8BQ9ULN7 279 aaPredicted RBP3.86□□□□□ -1.79
PTCD3-218ENST00000493430 MAFFQ9ULX9 164 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 PAXBP1Q9Y5B6 917 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 CDY1Q9Y6F8 540 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 SCN7AQ01118 1682 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 MAP3K19Q56UN5 1328 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 ZMYM2Q9UBW7 1377 aa3.86□□□□□ -1.79
PTCD3-218ENST00000493430 DICER1Q9UPY3 1922 aaKnown RBP3.85□□□□□ -1.79
PTCD3-218ENST00000493430 TNRC6CQ9HCJ0 1690 aaKnown RBP3.85□□□□□ -1.79
PTCD3-218ENST00000493430 ARFGEF2Q9Y6D5 1785 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 CCDC187A0A096LP49 1063 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 TMEM233B4DJY2 109 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 TMPRSS11DO60235 418 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 MARCH6O60337 910 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 TLR2O60603 784 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 RASAL1O95294 804 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 UQCRC1P31930 480 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 ME1P48163 572 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 MTHFSP49914 203 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 TIRAPP58753 221 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 LEXMQ3ZCV2 418 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 AWAT1Q58HT5 328 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 DCDC5Q6ZRR9 648 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 PIM3Q86V86 326 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 TCP11L2Q8N4U5 519 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 LINC01465Q8N7H1 131 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 PPP1R9BQ96SB3 815 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 VN1R3Q9BXE9 311 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 KRTAP2-2Q9BYT5 123 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 ZMAT3Q9HA38 289 aaKnown RBP3.85□□□□□ -1.79
PTCD3-218ENST00000493430 SMURF2Q9HAU4 748 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 NMRK2Q9NPI5 230 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 GAR1Q9NY12 217 aaKnown RBP3.85□□□□□ -1.79
PTCD3-218ENST00000493430 WWOXQ9NZC7 414 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 ANKRD36BQ8N2N9 1353 aa3.85□□□□□ -1.79
PTCD3-218ENST00000493430 CICQ96RK0 1608 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 H3BNX3 289 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 PHGDHO43175 533 aaKnown RBP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 RGS10O43665 173 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 SRGAP2O75044 1071 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 HSPA5P11021 654 aaKnown RBP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 CYP19A1P11511 503 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 EN2P19622 333 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 IBSPP21815 317 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 RPS13P62277 151 aaKnown RBP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 SRSF1Q07955 248 aaKnown RBP eCLIP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 KCNB1Q14721 858 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 ANO6Q4KMQ2 910 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 DCAF12L1Q5VU92 463 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 CACHD1Q5VU97 1274 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 KIAA1161Q6NSJ0 714 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 PIP4P1Q86T03 277 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 ANKRD13BQ86YJ7 626 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 MAFAQ8NHW3 353 aaPredicted RBP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 SLC35G2Q8TBE7 412 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 SPSB4Q96A44 273 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 SUCLG2Q96I99 432 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 AIFM3Q96NN9 605 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 ACO2Q99798 780 aaKnown RBP3.84□□□□□ -1.79
PTCD3-218ENST00000493430 TRIM36Q9NQ86 728 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 HEY2Q9UBP5 337 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 LRP12Q9Y561 859 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 HS3ST3B1Q9Y662 390 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 SQORQ9Y6N5 450 aa3.84□□□□□ -1.79
PTCD3-218ENST00000493430 ZNF831Q5JPB2 1677 aa3.84□□□□□ -1.8
PTCD3-218ENST00000493430 A0A1B0GUL6 1792 aa3.84□□□□□ -1.8
PTCD3-218ENST00000493430 LOC102723971A0A1B0GUV8 181 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 E2F8A0AVK6 867 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 PPM1GO15355 546 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 SPRY2O43597 315 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 CRYABP02511 175 aaKnown RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 ALPLP05186 524 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 CTSAP10619 480 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 PSG1P11464 419 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 ATF7P17544 494 aaPredicted RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 HOXC9P31274 260 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 AGFG1P52594 562 aaKnown RBP3.83□□□□□ -1.8
PTCD3-218ENST00000493430 CFHR3Q02985 330 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 CFHR1Q03591 330 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 SEC23BQ15437 767 aa3.83□□□□□ -1.8
PTCD3-218ENST00000493430 HSP90AB2PQ58FF8 381 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms