RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-218	ENST00000493339	PFKP	Q01813	784 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	SLC25A11	Q02978	314 aa	Known RBP	13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	SLC9B1	Q4ZJI4	515 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	GPAT2	Q6NUI2	795 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	TTLL6	Q8N841	843 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	GMCL1	Q96IK5	515 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	SERPINI1	Q99574	410 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	RIT2	Q99578	217 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	MXRA8	Q9BRK3	442 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	COG4	Q9H9E3	785 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	TCEAL9	Q9UHQ7	104 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	EMCN	Q9ULC0	261 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	AFG3L2	Q9Y4W6	797 aa		13.57	□□□□□ -0.24
PTK7-218	ENST00000493339	C7orf72	A4D263	438 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	HTR3E	A5X5Y0	456 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	KCNN4	O15554	427 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	KRT7	P08729	469 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	OCM2	P0CE71	109 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	OCM	P0CE72	109 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	P4HA1	P13674	534 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	PRKCH	P24723	683 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	GABRB2	P47870	512 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	NUP107	P57740	925 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	NLRP11	P59045	1033 aa	Known RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	HADH	Q16836	314 aa	Known RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	OGFOD2	Q6N063	350 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	BNC2	Q6ZN30	1099 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	C15orf39	Q6ZRI6	1047 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	CAND1	Q86VP6	1230 aa	Known RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	MYO1H	Q8N1T3	1032 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	MPP5	Q8N3R9	675 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	UBR7	Q8N806	425 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	COX4I2	Q96KJ9	171 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	RTKN	Q9BST9	563 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	STN1	Q9H668	368 aa	Known RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	PNPLA8	Q9NP80	782 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	EFR3B	Q9Y2G0	817 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	AMH	P03971	560 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	SERPINE1	P05121	402 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	CD151	P48509	253 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	HSPA13	P48723	471 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	PDCD4	Q53EL6	469 aa	Known RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	FSCB	Q5H9T9	825 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	DSEL	Q8IZU8	1212 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	IL31RA	Q8NI17	732 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	CCDC97	Q96F63	343 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	TMEM79	Q9BSE2	394 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	BRD8	Q9H0E9	1235 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	EHMT1	Q9H9B1	1298 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	ACSS2	Q9NR19	701 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	TCRBV5S1A1T	A0A578	114 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	FUOM	A2VDF0	154 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	SLC15A5	A6NIM6	579 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339		F5H423	210 aa	Predicted RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	TPP1	O14773	563 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	ADAM23	O75077	832 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	RNASEH2A	O75792	299 aa	Known RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	H6PD	O95479	791 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	C4BPA	P04003	597 aa	Known RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	KRT3	P12035	628 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	PRAME	P78395	509 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	PCLAF	Q15004	111 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	SEZ6	Q53EL9	994 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	TMEM179	Q6ZVK1	233 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	TRIM50	Q86XT4	487 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	THAP11	Q96EK4	314 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	VPS50	Q96JG6	964 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	KLHL32	Q96NJ5	620 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	BIRC8	Q96P09	236 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	OR52B2	Q96RD2	323 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	RANBP9	Q96S59	729 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	SLC2A11	Q9BYW1	496 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	DNAJC28	Q9NX36	388 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	MKS1	Q9NXB0	559 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	MYRF	Q9Y2G1	1151 aa		13.56	□□□□□ -0.24
PTK7-218	ENST00000493339	FAM189A1	O60320	539 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	PLIN3	O60664	434 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	IDO1	P14902	403 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	EIF2AK2	P19525	551 aa	Known RBP	13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	ADORA2A	P29274	412 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	SLC10A2	Q12908	348 aa	Predicted RBP	13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	CEACAM7	Q14002	265 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	DOK7	Q18PE1	504 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	PPM1J	Q5JR12	505 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	XKR5	Q6UX68	686 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	CHERP	Q8IWX8	916 aa	Known RBP	13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	ZNF781	Q8N8C0	355 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	KY	Q8NBH2	561 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	TMEM35B	Q8NCS4	154 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	MAPK15	Q8TD08	544 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	COQ10B	Q9H8M1	238 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	ZNF358	Q9NW07	568 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	CDC14A	Q9UNH5	594 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	ZNF195	O14628	629 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	CHAD	O15335	359 aa		13.55	□□□□□ -0.24
PTK7-218	ENST00000493339	RALB	P11234	206 aa		13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms