RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 FAM3CQ92520 227 aa17.51■□□□□ 0.39
RER1-208ENST00000493207 PBXIP1Q96AQ6 731 aa17.51■□□□□ 0.39
RER1-208ENST00000493207 CHFRQ96EP1 664 aa17.51■□□□□ 0.39
RER1-208ENST00000493207 PGAP3Q96FM1 320 aaPredicted RBP17.51■□□□□ 0.39
RER1-208ENST00000493207 MSANTD3Q96H12 275 aa17.51■□□□□ 0.39
RER1-208ENST00000493207 THAP2Q9H0W7 228 aa17.51■□□□□ 0.39
RER1-208ENST00000493207 C11orf16Q9NQ32 467 aa17.51■□□□□ 0.39
RER1-208ENST00000493207 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.51■□□□□ 0.399e-8■■■□□ 14.6
RER1-208ENST00000493207 KIAA1549LQ6ZVL6 1849 aa17.51■□□□□ 0.39
RER1-208ENST00000493207 GOLGA6L7A0A1B0GV03 622 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 NEDD8-MDP1E9PL57 170 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 MAN2B1O00754 1011 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 TRDMT1O14717 391 aaKnown RBP17.5■□□□□ 0.39
RER1-208ENST00000493207 ACSL4O60488 711 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 F9P00740 461 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 SLC2A3P11169 496 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 PTPN9P43378 593 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 ATXN1P54253 815 aaKnown RBP17.5■□□□□ 0.39
RER1-208ENST00000493207 GAD2Q05329 585 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 PON2Q15165 354 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 GAB4Q2WGN9 574 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 RAB6CQ53S08 254 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 ADGRF1Q5T601 910 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 SH3PXD2AQ5TCZ1 1133 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 NAIF1Q69YI7 327 aaPredicted RBP17.5■□□□□ 0.39
RER1-208ENST00000493207 NADSYN1Q6IA69 706 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 TXNDC11Q6PKC3 985 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 SND1Q7KZF4 910 aaKnown RBP eCLIP17.5■□□□□ 0.39
RER1-208ENST00000493207 FAM217AQ8IXS0 508 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 CPXM2Q8N436 756 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 BHMTQ93088 406 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 BTN2A3PQ96KV6 586 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 BBS2Q9BXC9 721 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 FOXQ1Q9C009 403 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 RAB6CQ9H0N0 254 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 XPO7Q9UIA9 1087 aaKnown RBP17.5■□□□□ 0.39
RER1-208ENST00000493207 STOML2Q9UJZ1 356 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 SCINQ9Y6U3 715 aa17.5■□□□□ 0.39
RER1-208ENST00000493207 KANSL1LA0AUZ9 987 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 KCNU1A8MYU2 1149 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 GOLGA6L6A8MZA4 724 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 TSPAN3O60637 253 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 SLC6A4P31645 630 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 RDXP35241 583 aaKnown RBP17.49■□□□□ 0.39
RER1-208ENST00000493207 CXCR3P49682 368 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 GALCP54803 685 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 AMPD2Q01433 879 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 PPP2R5DQ14738 602 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 UBXN2BQ14CS0 331 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 FAM133BQ5BKY9 247 aaKnown RBP17.49■□□□□ 0.39
RER1-208ENST00000493207 RFWD3Q6PCD5 774 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 BNIPLQ7Z465 357 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 C12orf40Q86WS4 652 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 NAT16Q8N8M0 369 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 ATP6V0D2Q8N8Y2 350 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 FAM172AQ8WUF8 416 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 AZIN2Q96A70 460 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 PACSIN1Q9BY11 444 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 WDCPQ9H6R7 721 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 MRPL47Q9HD33 250 aaKnown RBP17.49■□□□□ 0.39
RER1-208ENST00000493207 LTB4R2Q9NPC1 389 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 PLK2Q9NYY3 685 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 SLC12A6Q9UHW9 1150 aa17.49■□□□□ 0.39
RER1-208ENST00000493207 NDRG2Q9UN36 371 aaKnown RBP17.49■□□□□ 0.39
RER1-208ENST00000493207 MTF2Q9Y483 593 aaPredicted RBP17.49■□□□□ 0.39
RER1-208ENST00000493207 HOXC11O43248 304 aaPredicted RBP17.48■□□□□ 0.39
RER1-208ENST00000493207 CCP110O43303 1012 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 GPR37L1O60883 481 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 TYRP14679 529 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 ZNF143P52747 638 aaPredicted RBP17.48■□□□□ 0.39
RER1-208ENST00000493207 OGDHQ02218 1023 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 BRMS1LQ5PSV4 323 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 CWF19L1Q69YN2 538 aaKnown RBP17.48■□□□□ 0.39
RER1-208ENST00000493207 C1orf228Q6PIY5 440 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 FAM131BQ86XD5 332 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 DDI1Q8WTU0 396 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 ARHGEF26Q96DR7 871 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 P2RY11Q96G91 374 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 C1QTNF1Q9BXJ1 281 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 TKTL2Q9H0I9 626 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 ARHGEF38Q9NXL2 777 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 MARK1Q9P0L2 795 aa17.48■□□□□ 0.39
RER1-208ENST00000493207 MRPS17Q9Y2R5 130 aaKnown RBP17.48■□□□□ 0.39
RER1-208ENST00000493207 TMEM191CA6NGB0 347 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 SOWAHDA6NJG2 315 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 ENDOD1O94919 500 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 CYBBP04839 570 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 CYP1A2P05177 515 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 FECHP22830 423 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 OPRD1P41143 372 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 SLC6A11P48066 632 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 GALK1P51570 392 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 SGSHP51688 502 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 MS4A13Q5J8X5 152 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 TMEM31Q5JXX7 168 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 FYB2Q5VWT5 728 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 RAP1GAP2Q684P5 730 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 STRADAQ7RTN6 431 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 CHSY1Q86X52 802 aa17.47■□□□□ 0.39
RER1-208ENST00000493207 TMTC1Q8IUR5 882 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms