RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 MATKP42679 507 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 SOX9P48436 509 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 IFNAR2P48551 515 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 PGFP49763 221 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 LRRC32Q14392 662 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 TCEAL1Q15170 157 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 CDO1Q16878 200 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 ITPRIPL2Q3MIP1 535 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 HECTD3Q5T447 861 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 ZC3H14Q6PJT7 736 aaKnown RBP13.98□□□□□ -0.17
MSH6-208ENST00000493177 TADA2BQ86TJ2 420 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 RNF10Q8N5U6 811 aaKnown RBP13.98□□□□□ -0.17
MSH6-208ENST00000493177 ARL14EPQ8N8R7 260 aaPredicted RBP13.98□□□□□ -0.17
MSH6-208ENST00000493177 USP13Q92995 863 aaPredicted RBP13.98□□□□□ -0.17
MSH6-208ENST00000493177 CALR3Q96L12 384 aaKnown RBP13.98□□□□□ -0.17
MSH6-208ENST00000493177 CFAP57Q96MR6 1250 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 SLC2A13Q96QE2 648 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 TRIM7Q9C029 511 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 FAM204AQ9H8W3 233 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 GKN1Q9NS71 199 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 OSER1Q9NX31 292 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 CLIC5Q9NZA1 410 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.98□□□□□ -0.17
MSH6-208ENST00000493177 COX16Q9P0S2 106 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 IP6K2Q9UHH9 426 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 RASAL2Q9UJF2 1139 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 SALL4Q9UJQ4 1053 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 NUDT5Q9UKK9 219 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 CCL26Q9Y258 94 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 MUC6Q6W4X9 2439 aa13.98□□□□□ -0.17
MSH6-208ENST00000493177 C2orf78A6NCI8 922 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 SPECC1L-ADORA2AF8WAN1 911 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 GFRA3O60609 400 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 MTA2O94776 668 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 ZDHHC11BP0C7U3 371 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 SSR1P43307 286 aaKnown RBP13.97□□□□□ -0.17
MSH6-208ENST00000493177 ZNF143P52747 638 aaPredicted RBP13.97□□□□□ -0.17
MSH6-208ENST00000493177 ATP11AP98196 1134 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 AMPD2Q01433 879 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 OGDHQ02218 1023 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 TNK2Q07912 1038 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 PPP2R5DQ14738 602 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 C10orf120Q5SQS8 335 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 SYPL2Q5VXT5 272 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 TRNP1Q6NT89 227 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 ARCQ7LC44 396 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 ZSCAN30Q86W11 494 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 RALGPS2Q86X27 583 aaPredicted RBP13.97□□□□□ -0.17
MSH6-208ENST00000493177 TPCN2Q8NHX9 752 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 ADAM32Q8TC27 787 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 NKD2Q969F2 451 aaPredicted RBP13.97□□□□□ -0.17
MSH6-208ENST00000493177 EXOC4Q96A65 974 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 ALS2CR12Q96Q35 445 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 CYP2S1Q96SQ9 504 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 CDK5RAP1Q96SZ6 601 aaKnown RBP13.97□□□□□ -0.17
MSH6-208ENST00000493177 EBF3Q9H4W6 596 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 CCSER2Q9H7U1 834 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 LMAN1LQ9HAT1 526 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 OLA1Q9NTK5 396 aaKnown RBP13.97□□□□□ -0.17
MSH6-208ENST00000493177 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.97□□□□□ -0.17
MSH6-208ENST00000493177 DLGAP2Q9P1A6 1054 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 LCMT1Q9UIC8 334 aa13.97□□□□□ -0.17
MSH6-208ENST00000493177 MDM4O15151 490 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 KIF5CO60282 957 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 TLR5O60602 858 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 PALMO75781 387 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 FYNP06241 537 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 MBL2P11226 248 aaPredicted RBP13.96□□□□□ -0.17
MSH6-208ENST00000493177 CTHP32929 405 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 RPS9P46781 194 aaKnown RBP13.96□□□□□ -0.17
MSH6-208ENST00000493177 CSTF1Q05048 431 aaKnown RBP13.96□□□□□ -0.17
MSH6-208ENST00000493177 EFEMP1Q12805 493 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 NME3Q13232 169 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 RUNX3Q13761 415 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 PIGHQ14442 188 aaPredicted RBP13.96□□□□□ -0.17
MSH6-208ENST00000493177 PON2Q15165 354 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 C15orf59Q2T9L4 293 aaPredicted RBP13.96□□□□□ -0.17
MSH6-208ENST00000493177 CCDC14Q49A88 953 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 TRIM68Q6AZZ1 485 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 BEND5Q7L4P6 421 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 DAAM2Q86T65 1068 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 CPA6Q8N4T0 437 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 DQX1Q8TE96 717 aaKnown RBP13.96□□□□□ -0.17
MSH6-208ENST00000493177 SH3RF2Q8TEC5 729 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 FNIP1Q8TF40 1166 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 FAM172AQ8WUF8 416 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 LRRC3BQ96PB8 259 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 TBCBQ99426 244 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 CNPY3Q9BT09 278 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 KCND1Q9NSA2 647 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 DUS2Q9NX74 493 aaKnown RBP13.96□□□□□ -0.17
MSH6-208ENST00000493177 RRN3Q9NYV6 651 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 SFMBT1Q9UHJ3 866 aa13.96□□□□□ -0.17
MSH6-208ENST00000493177 GRID2IPA4D2P6 1211 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 M0QYT0 321 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 ARNTLO00327 626 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 SPOPO43791 374 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 BUB1BO60566 1050 aaPredicted RBP13.95□□□□□ -0.18
MSH6-208ENST00000493177 RNF8O76064 485 aa13.95□□□□□ -0.18
MSH6-208ENST00000493177 PROSCO94903 275 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms