RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 EFEMP1Q12805 493 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 MMRN1Q13201 1228 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 NNTQ13423 1086 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 BRMS1LQ5PSV4 323 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 C8orf74Q6P047 294 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 CCNI2Q6ZMN8 369 aaPredicted RBP14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 RTL10Q7L3V2 364 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 TKTL2Q9H0I9 626 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 DDX47Q9H0S4 455 aaKnown RBP14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 PLEKHA4Q9H4M7 779 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 HOMER3Q9NSC5 361 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 MTMR10Q9NXD2 777 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 MARCH2Q9P0N8 246 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 VPS18Q9P253 973 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 TLR6Q9Y2C9 796 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 TRANK1O15050 2925 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 DENND4CQ5VZ89 1909 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 TMEM265A0A087WTH1 108 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 TBX18O95935 607 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 SLC2A3P11169 496 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 ARL4AP40617 200 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 GYS2P54840 703 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 ADCY2Q08462 1091 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 PPP2R5DQ14738 602 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 CYP1B1Q16678 543 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 HSP90B2PQ58FF3 399 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 BBS12Q6ZW61 710 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 RFX6Q8HWS3 928 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 PYROXD2Q8N2H3 581 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 ELMOD1Q8N336 334 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 C12orf50Q8NA57 414 aaPredicted RBP14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 MAGOHBQ96A72 148 aaKnown RBP14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 RNF157Q96PX1 679 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 KCTD15Q96SI1 283 aaPredicted RBP14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 LMAN2LQ9H0V9 348 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 SLITRK6Q9H5Y7 841 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 CCSER2Q9H7U1 834 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 TMPRSS4Q9NRS4 437 aa14.6□□□□□ -0.07
PDZRN3-210ENST00000492909 CST8O60676 142 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 CLASP2O75122 1294 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 IL4RP24394 825 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 CHRNA3P32297 505 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 ATP5C1P36542 298 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 TUBP50607 506 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 TFDP2Q14188 446 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 PABPC1LQ4VXU2 614 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 GLE1Q53GS7 698 aaKnown RBP14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 ANKRD20A8PQ5CZ79 823 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 PPM1LQ5SGD2 360 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 HECTD3Q5T447 861 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 MIB1Q86YT6 1006 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 FAF2Q96CS3 445 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 GUCD1Q96NT3 240 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 LRRC1Q9BTT6 524 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 MAGEB5Q9BZ81 275 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 LRRC19Q9H756 370 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 ANLNQ9NQW6 1124 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 ARHGEF38Q9NXL2 777 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 RCOR3Q9P2K3 495 aaPredicted RBP14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 RASAL2Q9UJF2 1139 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 HPCAL4Q9UM19 191 aa14.59□□□□□ -0.07
PDZRN3-210ENST00000492909 I6L893 689 aaPredicted RBP14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 TNNT3P45378 269 aaPredicted RBP14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 KPNA1P52294 538 aaPredicted RBP14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 TBX4P57082 545 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 DYNLT1P63172 113 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 ADGRE1Q14246 886 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 TRIP4Q15650 581 aaPredicted RBP14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 CCNG2Q16589 344 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 GPR153Q6NV75 609 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 KLHDC10Q6PID8 442 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 TTC13Q8NBP0 860 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 CCDC26Q8TAB7 109 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 C1orf54Q8WWF1 131 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 SLC39A13Q96H72 371 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 CDX2Q99626 313 aaPredicted RBP14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 DCLK3Q9C098 648 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 NACA2Q9H009 215 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 ZNF334Q9HCZ1 680 aaPredicted RBP14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 MAN1C1Q9NR34 630 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 CWC15Q9P013 229 aaKnown RBP14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 DPP7Q9UHL4 492 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 DNMT3LQ9UJW3 386 aa14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 R3HDM2Q9Y2K5 976 aaKnown RBP14.58□□□□□ -0.08
PDZRN3-210ENST00000492909 SLC12A8A0AV02 714 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 H3BRJ5 948 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 CREB3O43889 395 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 ZMYND10O75800 440 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 GOT1P17174 413 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 FNTAP49354 379 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 ZNF135P52742 658 aaPredicted RBP14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 HNRNPH2P55795 449 aaKnown RBP14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 CCDC137Q6PK04 289 aaKnown RBP14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 MAATS1Q7Z4T9 603 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 PCDH19Q8TAB3 1148 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 SLC22A17Q8WUG5 538 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 HDAC7Q8WUI4 952 aa14.57□□□□□ -0.08
PDZRN3-210ENST00000492909 MYLIPQ8WY64 445 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms