RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SOWAHDA6NJG2 315 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 TNFRSF10AO00220 468 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 GFRA2O00451 464 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 MAN2B1O00754 1011 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 HOXC11O43248 304 aaPredicted RBP16.44■□□□□ 0.22
TRA2A-208ENST00000490942 ACSL4O60488 711 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 MTA2O94776 668 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 HMBSP08397 361 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 EIF2DP41214 584 aaKnown RBP16.44■□□□□ 0.22
TRA2A-208ENST00000490942 MAGEA1P43355 309 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 KRT83P78385 493 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 NME3Q13232 169 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 PIGHQ14442 188 aaPredicted RBP16.44■□□□□ 0.22
TRA2A-208ENST00000490942 ZC3H12AQ5D1E8 599 aaKnown RBP16.44■□□□□ 0.22
TRA2A-208ENST00000490942 MPP7Q5T2T1 576 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 PHLDB2Q86SQ0 1253 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 NIPA2Q8N8Q9 360 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 ST13P5Q8NFI4 369 aaPredicted RBP16.44■□□□□ 0.22
TRA2A-208ENST00000490942 WBP2Q969T9 261 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 NTAN1Q96AB6 310 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 C1orf74Q96LT6 269 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 COL25A1Q9BXS0 654 aaPredicted RBP16.44■□□□□ 0.22
TRA2A-208ENST00000490942 LINC00597Q9H2U6 94 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 WDCPQ9H6R7 721 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 SPHK2Q9NRA0 654 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 PIGVQ9NUD9 493 aa16.44■□□□□ 0.22
TRA2A-208ENST00000490942 ARHGAP6O43182 974 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 ATMINO43313 823 aaPredicted RBP16.43■□□□□ 0.22
TRA2A-208ENST00000490942 CYP17A1P05093 508 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 HADHBP55084 474 aaKnown RBP16.43■□□□□ 0.22
TRA2A-208ENST00000490942 HDAC4P56524 1084 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 GAD2Q05329 585 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 DHCR24Q15392 516 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 ARL13BQ3SXY8 428 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 SLC44A4Q53GD3 710 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 RHBDF2Q6PJF5 856 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 RAD9BQ6WBX8 426 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 LRRC8AQ8IWT6 810 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 ZNF557Q8N988 423 aaPredicted RBP16.43■□□□□ 0.22
TRA2A-208ENST00000490942 FAM172AQ8WUF8 416 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 RFFLQ8WZ73 363 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 RNF34Q969K3 372 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 ZFYVE19Q96K21 471 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 HAPLN3Q96S86 360 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 NUP85Q9BW27 656 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 ADAM33Q9BZ11 813 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 EBF3Q9H4W6 596 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 ARHGEF3Q9NR81 526 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 CALCOCO1Q9P1Z2 691 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 MYO1AQ9UBC5 1043 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 IP6K2Q9UHH9 426 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 PCDHA13Q9Y5I0 950 aa16.43■□□□□ 0.22
TRA2A-208ENST00000490942 A0A0A6YYK5 440 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-208ENST00000490942 FAM170AA1A519 330 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 MYO1FO00160 1098 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 CCP110O43303 1012 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 RNF8O76064 485 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 GJB6O95452 261 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 CYBBP04839 570 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 ARSAP15289 507 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 TFE3P19532 575 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-208ENST00000490942 PSMA2P25787 234 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 PCK1P35558 622 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 ARHGAP25P42331 645 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 STARD6P59095 220 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 ATP11AP98196 1134 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 OGDHQ02218 1023 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 NRG1Q02297 640 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-208ENST00000490942 TNK2Q07912 1038 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 SCAPQ12770 1279 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 MLF2Q15773 248 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-208ENST00000490942 PREPLQ4J6C6 727 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-208ENST00000490942 MPPE1Q53F39 396 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 TRIM68Q6AZZ1 485 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 TRIM67Q6ZTA4 783 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 DNAAF5Q86Y56 855 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 SUGP1Q8IWZ8 645 aaKnown RBP16.42■□□□□ 0.22
TRA2A-208ENST00000490942 TTC16Q8NEE8 873 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 ZNF564Q8TBZ8 553 aaPredicted RBP16.42■□□□□ 0.22
TRA2A-208ENST00000490942 ARHGEF26Q96DR7 871 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 NELL2Q99435 816 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 PACSIN1Q9BY11 444 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 CTTNBP2NLQ9P2B4 639 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 FBXL21Q9UKT6 434 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 COL4A2P08572 1712 aa16.42■□□□□ 0.22
TRA2A-208ENST00000490942 BTNL10A8MVZ5 291 aa16.41■□□□□ 0.22
TRA2A-208ENST00000490942 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.41■□□□□ 0.22
TRA2A-208ENST00000490942 PENKP01210 267 aaPredicted RBP16.41■□□□□ 0.22
TRA2A-208ENST00000490942 ADH5P11766 374 aa16.41■□□□□ 0.22
TRA2A-208ENST00000490942 CTHP32929 405 aa16.41■□□□□ 0.22
TRA2A-208ENST00000490942 MAN1A1P33908 653 aa16.41■□□□□ 0.22
TRA2A-208ENST00000490942 GJA4P35212 333 aa16.41■□□□□ 0.22
TRA2A-208ENST00000490942 ZNF252P-AS1Q0IIN9 211 aa16.41■□□□□ 0.22
TRA2A-208ENST00000490942 C15orf59Q2T9L4 293 aaPredicted RBP16.41■□□□□ 0.22
TRA2A-208ENST00000490942 C5orf22Q49AR2 442 aa16.41■□□□□ 0.22
TRA2A-208ENST00000490942 FAM133BQ5BKY9 247 aaKnown RBP16.41■□□□□ 0.22
TRA2A-208ENST00000490942 LY6G5CQ5SRR4 150 aa16.41■□□□□ 0.22
TRA2A-208ENST00000490942 TTC39BQ5VTQ0 682 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms