RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ANKRD20A12PQ8NF67 263 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 OLIG1Q8TAK6 271 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 ENOX1Q8TC92 643 aaKnown RBP18.16■□□□□ 0.5
SEC13-218ENST00000490283 GPT2Q8TD30 523 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 DQX1Q8TE96 717 aaKnown RBP18.16■□□□□ 0.5
SEC13-218ENST00000490283 IPO4Q8TEX9 1081 aaKnown RBP18.16■□□□□ 0.5
SEC13-218ENST00000490283 ACOX2Q99424 681 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 GABRG3Q99928 467 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 SYNCQ9H7C4 482 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 SIX2Q9NPC8 291 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 VPS45Q9NRW7 570 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 ANO10Q9NW15 660 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 CACNA2D2Q9NY47 1150 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 DLL3Q9NYJ7 618 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 PCDHGC3Q9UN70 934 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 TLR6Q9Y2C9 796 aa18.16■□□□□ 0.5
SEC13-218ENST00000490283 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.15■□□□□ 0.5
SEC13-218ENST00000490283 PAPSS1O43252 624 aaPredicted RBP18.15■□□□□ 0.5
SEC13-218ENST00000490283 TIMM44O43615 452 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 ACSL4O60488 711 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 ZNF217O75362 1048 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 IGLV3-27P01718 113 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 APOEP02649 317 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 ZNF806P0C7X5 589 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 HOXD9P28356 352 aaPredicted RBP18.15■□□□□ 0.5
SEC13-218ENST00000490283 DHPSP49366 369 aaPredicted RBP18.15■□□□□ 0.5
SEC13-218ENST00000490283 YWHAZP63104 245 aaKnown RBP18.15■□□□□ 0.5
SEC13-218ENST00000490283 GEN1Q17RS7 908 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 FKBP15Q5T1M5 1219 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 CYP2U1Q7Z449 544 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 WFIKKN2Q8TEU8 576 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 RLN3Q8WXF3 142 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 AZIN2Q96A70 460 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 PIWIL1Q96J94 861 aaKnown RBP18.15■□□□□ 0.5
SEC13-218ENST00000490283 PPP1R13BQ96KQ4 1090 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 RTKNQ9BST9 563 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 LSM14BQ9BX40 385 aaKnown RBP18.15■□□□□ 0.5
SEC13-218ENST00000490283 LHX5Q9H2C1 402 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 ELOVL2Q9NXB9 296 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 CYTH4Q9UIA0 394 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 NAALADL1Q9UQQ1 740 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 STON1Q9Y6Q2 735 aa18.15■□□□□ 0.5
SEC13-218ENST00000490283 A0A1W2PQF6 199 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 FOXN3O00409 490 aaPredicted RBP18.14■□□□□ 0.49
SEC13-218ENST00000490283 SYNCRIPO60506 623 aaKnown RBP18.14■□□□□ 0.49
SEC13-218ENST00000490283 CAVIN2O95810 425 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 GABRG2P18507 467 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 CCDC6Q16204 474 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 STX1AQ16623 288 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 EFHC1Q5JVL4 640 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 MPP7Q5T2T1 576 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 SLC36A4Q6YBV0 504 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 RBM43Q6ZSC3 357 aaKnown RBP18.14■□□□□ 0.49
SEC13-218ENST00000490283 HJURPQ8NCD3 748 aaPredicted RBP18.14■□□□□ 0.49
SEC13-218ENST00000490283 TAB2Q9NYJ8 693 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 CALCOCO1Q9P1Z2 691 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 THAP10Q9P2Z0 257 aaPredicted RBP18.14■□□□□ 0.49
SEC13-218ENST00000490283 SLC12A6Q9UHW9 1150 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 HCN2Q9UL51 889 aa18.14■□□□□ 0.49
SEC13-218ENST00000490283 BCLAF3A2AJT9 711 aaKnown RBP18.13■□□□□ 0.49
SEC13-218ENST00000490283 TBL1XO60907 577 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 MOCS2O96007 188 aaPredicted RBP18.13■□□□□ 0.49
SEC13-218ENST00000490283 FYNP06241 537 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 GLI1P08151 1106 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 BCKDHBP21953 392 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 DPP6P42658 865 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 CDK17Q00537 523 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 DRAP1Q14919 205 aaPredicted RBP18.13■□□□□ 0.49
SEC13-218ENST00000490283 SF3A2Q15428 464 aaKnown RBP18.13■□□□□ 0.49
SEC13-218ENST00000490283 KLHDC7AQ5VTJ3 777 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 RFWD3Q6PCD5 774 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 C11orf57Q6ZUT1 292 aaPredicted RBP18.13■□□□□ 0.49
SEC13-218ENST00000490283 TAC4Q86UU9 113 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 SLC47A2Q86VL8 602 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 FAM71AQ8IYT1 594 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 C1orf131Q8NDD1 294 aaKnown RBP18.13■□□□□ 0.49
SEC13-218ENST00000490283 ADAM32Q8TC27 787 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 P2RY11Q96G91 374 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 FCRL2Q96LA5 508 aaPredicted RBP18.13■□□□□ 0.49
SEC13-218ENST00000490283 FAM204AQ9H8W3 233 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 ASNSD1Q9NWL6 643 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 TJP2Q9UDY2 1190 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 GGA2Q9UJY4 613 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 AJAP1Q9UKB5 411 aaPredicted RBP18.13■□□□□ 0.49
SEC13-218ENST00000490283 PLA2G4CQ9UP65 541 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 RAD54BQ9Y620 910 aa18.13■□□□□ 0.49
SEC13-218ENST00000490283 SPTBN4Q9H254 2564 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 AP5Z1O43299 807 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 HSF2BPO75031 334 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 TRUB2O95900 331 aaKnown RBP18.12■□□□□ 0.49
SEC13-218ENST00000490283 PNMA6AP0CW24 399 aaPredicted RBP18.12■□□□□ 0.49
SEC13-218ENST00000490283 NDUFV2P19404 249 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 MAP7D1Q3KQU3 841 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 DCAF6Q58WW2 860 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 SPDYCQ5MJ68 293 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 PLA2G2CQ5R387 149 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 CCDC183Q5T5S1 534 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 PIK3R6Q5UE93 754 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 SYPL2Q5VXT5 272 aa18.12■□□□□ 0.49
SEC13-218ENST00000490283 OR6B2Q6IFH4 312 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms