RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 ELMO3Q96BJ8 720 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 ERLEC1Q96DZ1 483 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 IPO9Q96P70 1041 aaKnown RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 TWNKQ96RR1 684 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 LHX5Q9H2C1 402 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 TM7SF3Q9NS93 570 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 KIAA1522Q9P206 1035 aaPredicted RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 HESX1Q9UBX0 185 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 PCOLCE2Q9UKZ9 415 aa12.33□□□□□ -0.44
FDPS-215ENST00000490140 AGO1Q9UL18 857 aaKnown RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 HBS1LQ9Y450 684 aaKnown RBP12.33□□□□□ -0.44
FDPS-215ENST00000490140 APC2O95996 2303 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 SLC12A8A0AV02 714 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 TYW5A2RUC4 315 aaKnown RBP12.32□□□□□ -0.44
FDPS-215ENST00000490140 RHOBTB3O94955 611 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 ZBED1O96006 694 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 ATP5BP06576 529 aaKnown RBP12.32□□□□□ -0.44
FDPS-215ENST00000490140 TRIM49P0CI25 452 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 TRIM49CP0CI26 452 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
FDPS-215ENST00000490140 PFKFB1P16118 471 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 CMA1P23946 247 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 MAOBP27338 520 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 FAM193AP78312 1265 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 FNDC3BQ53EP0 1204 aaKnown RBP12.32□□□□□ -0.44
FDPS-215ENST00000490140 SCD5Q86SK9 330 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 FAM217AQ8IXS0 508 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 GUF1Q8N442 669 aaKnown RBP12.32□□□□□ -0.44
FDPS-215ENST00000490140 ANKRD52Q8NB46 1076 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 OR2T3Q8NH03 318 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 SKA1Q96BD8 255 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 TMEM176AQ96HP8 235 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 PIWIL1Q96J94 861 aaKnown RBP12.32□□□□□ -0.44
FDPS-215ENST00000490140 IRX2Q9BZI1 471 aaPredicted RBP12.32□□□□□ -0.44
FDPS-215ENST00000490140 MMRN2Q9H8L6 949 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 LRRC4Q9HBW1 653 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 RCOR1Q9UKL0 485 aa12.32□□□□□ -0.44
FDPS-215ENST00000490140 DFNA5O60443 496 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 KLKB1P03952 638 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 DNTTP04053 509 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 GRK6P43250 576 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 SYKP43405 635 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 GRIA4P48058 902 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 TKTL1P51854 596 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 PPP3CAQ08209 521 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 SCAPQ12770 1279 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 ADAM9Q13443 819 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 CAMK2GQ13555 558 aaPredicted RBP12.31□□□□□ -0.44
FDPS-215ENST00000490140 EDRF1Q3B7T1 1238 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 ZNF394Q53GI3 561 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 RAB41Q5JT25 222 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 C1orf220Q5T0J3 134 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 ARHGAP17Q68EM7 881 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 CCNI2Q6ZMN8 369 aaPredicted RBP12.31□□□□□ -0.44
FDPS-215ENST00000490140 PIGZQ86VD9 579 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 CCDC117Q8IWD4 279 aaPredicted RBP12.31□□□□□ -0.44
FDPS-215ENST00000490140 AHI1Q8N157 1196 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 SIX6OS1Q8N1H7 587 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 CAMK1GQ96NX5 476 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 APOBEC3GQ9HC16 384 aaKnown RBP12.31□□□□□ -0.44
FDPS-215ENST00000490140 OSGEPQ9NPF4 335 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 CD93Q9NPY3 652 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 CISHQ9NSE2 258 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 EIF2B4Q9UI10 523 aaKnown RBP12.31□□□□□ -0.44
FDPS-215ENST00000490140 SCML1Q9UN30 329 aa12.31□□□□□ -0.44
FDPS-215ENST00000490140 CABIN1Q9Y6J0 2220 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 LAMA5O15230 3695 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 KCNJ18B7U540 433 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 XPO1O14980 1071 aaKnown RBP12.3□□□□□ -0.44
FDPS-215ENST00000490140 CBFA2T3O75081 653 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 SETSIPP0DME0 302 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 CCT8P50990 548 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 COPAP53621 1224 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 KRT85P78386 507 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 DNM1Q05193 864 aaKnown RBP12.3□□□□□ -0.44
FDPS-215ENST00000490140 BST2Q10589 180 aaKnown RBP12.3□□□□□ -0.44
FDPS-215ENST00000490140 HLA-BQ31612 363 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 SGO2Q562F6 1265 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 ADAT2Q7Z6V5 191 aaKnown RBP12.3□□□□□ -0.44
FDPS-215ENST00000490140 CACUL1Q86Y37 369 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 RHBDD1Q8TEB9 315 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 IGSF8Q969P0 613 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 SPATA32Q96LK8 384 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 ARID3AQ99856 593 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 DDX50Q9BQ39 737 aaKnown RBP12.3□□□□□ -0.44
FDPS-215ENST00000490140 BTBD1Q9H0C5 482 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 SGK2Q9HBY8 427 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 ABCC13Q9NSE7 274 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 RAB20Q9NX57 234 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 DKK4Q9UBT3 224 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 FNDC3AQ9Y2H6 1198 aaKnown RBP12.3□□□□□ -0.44
FDPS-215ENST00000490140 ATP6V1DQ9Y5K8 247 aa12.3□□□□□ -0.44
FDPS-215ENST00000490140 KNL1Q8NG31 2342 aa12.29□□□□□ -0.44
FDPS-215ENST00000490140 A0A1B0GVL5 298 aa12.29□□□□□ -0.44
FDPS-215ENST00000490140 CETN3O15182 167 aa12.29□□□□□ -0.44
FDPS-215ENST00000490140 IRAK2O43187 625 aa12.29□□□□□ -0.44
FDPS-215ENST00000490140 RNASEH1O60930 286 aaKnown RBP12.29□□□□□ -0.44
FDPS-215ENST00000490140 SEMA4FO95754 770 aa12.29□□□□□ -0.44
FDPS-215ENST00000490140 DLDP09622 509 aaKnown RBP12.29□□□□□ -0.44
FDPS-215ENST00000490140 PRKCHP24723 683 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms