RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 ERMARDQ5T6L9 678 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 MTSS1LQ765P7 747 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 SH3RF2Q8TEC5 729 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 CD101Q93033 1021 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 HAPLN3Q96S86 360 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 MYADMQ96S97 322 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 DDX50Q9BQ39 737 aaKnown RBP14.41□□□□□ -0.1
C9orf3-221ENST00000489562 PHF7Q9BWX1 381 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-221ENST00000489562 IRX2Q9BZI1 471 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-221ENST00000489562 TKTL2Q9H0I9 626 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 ZFP14Q9HCL3 533 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 GKN1Q9NS71 199 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 DDX56Q9NY93 547 aaKnown RBP14.41□□□□□ -0.1
C9orf3-221ENST00000489562 CFAP97Q9P2B7 532 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 EPS15L1Q9UBC2 864 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 NR2E1Q9Y466 385 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 JRKLQ9Y4A0 524 aa14.41□□□□□ -0.1
C9orf3-221ENST00000489562 KIF2AO00139 706 aaPredicted RBP14.4□□□□□ -0.1
C9orf3-221ENST00000489562 SLC9A3R1O14745 358 aaPredicted RBP14.4□□□□□ -0.1
C9orf3-221ENST00000489562 FTCDO95954 541 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 CTNNA2P26232 953 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 CORO1AP31146 461 aaKnown RBP14.4□□□□□ -0.1
C9orf3-221ENST00000489562 CTNNA1P35221 906 aaKnown RBP14.4□□□□□ -0.1
C9orf3-221ENST00000489562 KCNQ1P51787 676 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 ZNF135P52742 658 aaPredicted RBP14.4□□□□□ -0.1
C9orf3-221ENST00000489562 ATXN1P54253 815 aaKnown RBP14.4□□□□□ -0.1
C9orf3-221ENST00000489562 GNG11P61952 73 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 ZNF77Q15935 545 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 RAB6CQ53S08 254 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 PTCRAQ6ISU1 281 aaPredicted RBP14.4□□□□□ -0.1
C9orf3-221ENST00000489562 HTR3DQ70Z44 454 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 PLCD3Q8N3E9 789 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 C17orf53Q8N3J3 647 aaPredicted RBP14.4□□□□□ -0.1
C9orf3-221ENST00000489562 UBL4BQ8N7F7 174 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 TDRD5Q8NAT2 981 aaKnown RBP14.4□□□□□ -0.1
C9orf3-221ENST00000489562 ADAMTS19Q8TE59 1207 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 OTUB2Q96DC9 234 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 RAB6CQ9H0N0 254 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 GOLPH3Q9H4A6 298 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 TBC1D14Q9P2M4 693 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 PCSK1NQ9UHG2 260 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 FZD10Q9ULW2 581 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 AP4E1Q9UPM8 1137 aa14.4□□□□□ -0.1
C9orf3-221ENST00000489562 SZT2Q5T011 3432 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 ACSL4O60488 711 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 MOCS2O96007 188 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-221ENST00000489562 IRF1P10914 325 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 IL1R2P27930 398 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 HTR7P34969 479 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 TAS2R40P59535 323 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 ZXDBP98169 803 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 NRG1Q02297 640 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-221ENST00000489562 ODF2Q5BJF6 829 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 MEI1Q5TIA1 1274 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 DAB2IPQ5VWQ8 1189 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 Q6ZNB5 142 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 CYP4V2Q6ZWL3 525 aaPredicted RBP14.39□□□□□ -0.11
C9orf3-221ENST00000489562 SLC35F6Q8N357 371 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 CCDC185Q8N715 623 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 BPIFB1Q8TDL5 484 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 ELSPBP1Q96BH3 223 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 HES6Q96HZ4 224 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 C1orf74Q96LT6 269 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 PEBP4Q96S96 227 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 SNRNP25Q9BV90 132 aaKnown RBP14.39□□□□□ -0.11
C9orf3-221ENST00000489562 SMG9Q9H0W8 520 aaKnown RBP14.39□□□□□ -0.11
C9orf3-221ENST00000489562 OSBPL2Q9H1P3 480 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 ZWILCHQ9H900 591 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 STOML2Q9UJZ1 356 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 CCL26Q9Y258 94 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 HYOU1Q9Y4L1 999 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 PCDHA3Q9Y5H8 950 aa14.39□□□□□ -0.11
C9orf3-221ENST00000489562 GREM1O60565 184 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 PAGE1O75459 146 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 ECI2O75521 394 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 KLKB1P03952 638 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 RARAP10276 462 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 TCF4P15884 667 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 FCARP24071 287 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 CHKAP35790 457 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 ETF1P62495 437 aaKnown RBP14.38□□□□□ -0.11
C9orf3-221ENST00000489562 PDK2Q15119 407 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 RPS6KA1Q15418 735 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 DPYSL2Q16555 572 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 ZFYVE27Q5T4F4 411 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 ADGRF1Q5T601 910 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 POTEHQ6S545 545 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 NYAP1Q6ZVC0 841 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 VSIG1Q86XK7 387 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 CPNE8Q86YQ8 564 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 DENND1CQ8IV53 801 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 MAP7D3Q8IWC1 876 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 KATNAL2Q8IYT4 538 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 DEPDC1BQ8WUY9 529 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 NXPE3Q969Y0 559 aa14.38□□□□□ -0.11
C9orf3-221ENST00000489562 THG1LQ9NWX6 298 aaKnown RBP14.38□□□□□ -0.11
C9orf3-221ENST00000489562 AGO1Q9UL18 857 aaKnown RBP14.38□□□□□ -0.11
C9orf3-221ENST00000489562 HEPACAM2A8MVW5 462 aa14.37□□□□□ -0.11
C9orf3-221ENST00000489562 ZNF487B1APH4 448 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms