RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TUBGCP4Q9UGJ1 667 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 GIT1Q9Y2X7 761 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 IPPQ9Y573 584 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 TRPV2Q9Y5S1 764 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 RAD54BQ9Y620 910 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 FAM169AQ9Y6X4 670 aa8.78□□□□□ -1
VTI1A-207ENST00000489357 FNDC1Q4ZHG4 1894 aaPredicted RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 GOLGA6L7A0A1B0GV03 622 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 EXOC1LA0A1B0GW35 172 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 HACD1B0YJ81 288 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 GPR182O15218 404 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 PRPF4O43172 522 aaKnown RBP eCLIP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 PAPSS1O43252 624 aaPredicted RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 ATP9BO43861 1147 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 EFCAB14O75071 495 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 BAIAP3O94812 1187 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 CPP00450 1065 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 RPL22P35268 128 aaKnown RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 MATKP42679 507 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 VPS41P49754 854 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 GEMIN4P57678 1058 aaKnown RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 LILRA4P59901 499 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 IFI35P80217 286 aaPredicted RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 RNASELQ05823 741 aaKnown RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 PDE4CQ08493 712 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 DSC3Q14574 896 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 LONRF1Q17RB8 773 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 CTC1Q2NKJ3 1217 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 SLC25A52Q3SY17 297 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 CCDC38Q502W7 563 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 EFHC2Q5JST6 749 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 C6orf89Q6UWU4 347 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 RGS9BPQ6ZS82 235 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 Q7L0L9 218 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 DEFB128Q7Z7B8 93 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 ADGRF2Q8IZF7 708 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 SCML4Q8N228 414 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 OTUD6BQ8N6M0 293 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 GBP7Q8N8V2 638 aaPredicted RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 B3GALNT2Q8NCR0 500 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 MCUQ8NE86 351 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 PHOSPHO2Q8TCD6 241 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 FAM172AQ8WUF8 416 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 CPT1BQ92523 772 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 HSPH1Q92598 858 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 NT5C3BQ969T7 300 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 CCDC97Q96F63 343 aaPredicted RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 PPP1R10Q96QC0 940 aaKnown RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 PPP1R16BQ96T49 567 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 SELENOSQ9BQE4 189 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 DUSP16Q9BY84 665 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 KLC2Q9H0B6 622 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 ZFAND3Q9H8U3 227 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 SAYSD1Q9NPB0 183 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 NKIRAS1Q9NYS0 192 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 SAMD15Q9P1V8 674 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 PSMC3IPQ9P2W1 217 aaPredicted RBP8.77□□□□□ -1.01
VTI1A-207ENST00000489357 TJP2Q9UDY2 1190 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 STAP1Q9ULZ2 295 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 TRIP11Q15643 1979 aa8.77□□□□□ -1.01
VTI1A-207ENST00000489357 SCN1AP35498 2009 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 COL4A6Q14031 1691 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 TMEM265A0A087WTH1 108 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 TMEM120BA0PK00 339 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 FAM47DPA6NHR8 397 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 C9IYK1 514 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 ENPP3O14638 875 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 CAPN5O15484 640 aaPredicted RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 LZTS3O60299 673 aaPredicted RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 ZNF623O75123 536 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 DAB1O75553 588 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 FSBPO95073 299 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 IFNB1P01574 187 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 CTSHP09668 335 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 GHRP10912 638 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 BRAFP15056 766 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 NPR3P17342 541 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 DRD4P21917 467 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 NOS2P35228 1153 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 SEC24CP53992 1094 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 HDAC4P56524 1084 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 BCAR1P56945 870 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 FAM189BP81408 668 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 TMEM62Q0P6H9 643 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 PDIA2Q13087 525 aaKnown RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 SMTNL2Q2TAL5 461 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 ANKRD20A8PQ5CZ79 823 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 KCNT1Q5JUK3 1230 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 TWF2Q6IBS0 349 aaKnown RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 FAM109BQ6ICB4 259 aaPredicted RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 TRNP1Q6NT89 227 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 DARS2Q6PI48 645 aaKnown RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 CYS1Q717R9 158 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 BEND5Q7L4P6 421 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 BNIPLQ7Z465 357 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 PIGWQ7Z7B1 504 aa8.76□□□□□ -1.01
VTI1A-207ENST00000489357 MRPL10Q7Z7H8 261 aaKnown RBP8.76□□□□□ -1.01
VTI1A-207ENST00000489357 TRABD2AQ86V40 505 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms