RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 SPHK2Q9NRA0 654 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 DDIT4Q9NX09 232 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 GTSE1Q9NYZ3 720 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 LCMT1Q9UIC8 334 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 STOML2Q9UJZ1 356 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 PIAS3Q9Y6X2 628 aa12.94□□□□□ -0.34
COL4A5-206ENST00000489230 NUP210Q8TEM1 1887 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-206ENST00000489230 A0A087X0T9 212 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-206ENST00000489230 ENDOD1O94919 500 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 KLKB1P03952 638 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 PLEKP08567 350 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-206ENST00000489230 FAM228BP0C875 321 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 RRM1P23921 792 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 PTPN9P43378 593 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 GSDMDP57764 484 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 DEUP1Q05D60 604 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 TNK2Q07912 1038 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 NME3Q13232 169 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 MAMLD1Q13495 774 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 EIF4EBP2Q13542 120 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-206ENST00000489230 ASTE1Q2TB18 679 aaPredicted RBP12.93□□□□□ -0.34
COL4A5-206ENST00000489230 ARL13BQ3SXY8 428 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 MPPE1Q53F39 396 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 BRMS1LQ5PSV4 323 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 TRIM68Q6AZZ1 485 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 PLEKHA7Q6IQ23 1121 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 RHBDF2Q6PJF5 856 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 TAC4Q86UU9 113 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 RXFP2Q8WXD0 754 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 FAM3CQ92520 227 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 XPO6Q96QU8 1125 aaKnown RBP12.93□□□□□ -0.34
COL4A5-206ENST00000489230 GRPEL1Q9HAV7 217 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 HPS4Q9NQG7 708 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 METTL5Q9NRN9 209 aaKnown RBP12.93□□□□□ -0.34
COL4A5-206ENST00000489230 HEBP1Q9NRV9 189 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 TAS2R14Q9NYV8 317 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 CNOT8Q9UFF9 292 aaKnown RBP12.93□□□□□ -0.34
COL4A5-206ENST00000489230 CA14Q9ULX7 337 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 FAM186AA6NE01 2351 aa12.93□□□□□ -0.34
COL4A5-206ENST00000489230 RIF1Q5UIP0 2472 aaKnown RBP12.93□□□□□ -0.34
COL4A5-206ENST00000489230 KANSL1LA0AUZ9 987 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 TYW5A2RUC4 315 aaKnown RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 C2CD4BA6NLJ0 364 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 KCNU1A8MYU2 1149 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 SPECC1L-ADORA2AF8WAN1 911 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 MSI1O43347 362 aaKnown RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ACSL4O60488 711 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 IPO7O95373 1038 aaKnown RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 H2AFZP0C0S5 128 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ADH5P11766 374 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ARSAP15289 507 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 GPD1P21695 349 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 GJA4P35212 333 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 RDXP35241 583 aaKnown RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 RFC1P35251 1148 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 CYLC1P35663 651 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 EIF2DP41214 584 aaKnown RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 CXCR3P49682 368 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 SULT1E1P49888 294 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ZNF143P52747 638 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 GRSF1Q12849 480 aaKnown RBP eCLIP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ACAP1Q15027 740 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 E2F5Q15329 346 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 SPA17Q15506 151 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ANO4Q32M45 955 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ZC3H12AQ5D1E8 599 aaKnown RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 LY6G5CQ5SRR4 150 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 MPP7Q5T2T1 576 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 H2AFVQ71UI9 128 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 STRADAQ7RTN6 431 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 PHLDB2Q86SQ0 1253 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 CCDC117Q8IWD4 279 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 FAM217AQ8IXS0 508 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ZNF557Q8N988 423 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 RIN3Q8TB24 985 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ADAM32Q8TC27 787 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 CENPIQ92674 756 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 ZNF653Q96CK0 615 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 TMA16Q96EY4 203 aaKnown RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 PIWIL1Q96J94 861 aaKnown RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 FCRL2Q96LA5 508 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-206ENST00000489230 C1orf74Q96LT6 269 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 CHP1Q99653 195 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 CNPY3Q9BT09 278 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 MARK1Q9P0L2 795 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 INTUQ9ULD6 942 aa12.92□□□□□ -0.34
COL4A5-206ENST00000489230 SPTBN4Q9H254 2564 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 OBSL1O75147 1896 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 TCRBV5S1A1TA0A578 114 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 KRBA1A5PL33 1030 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 TMEM191CA6NGB0 347 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 TRDMT1O14717 391 aaKnown RBP12.91□□□□□ -0.34
COL4A5-206ENST00000489230 HOXC11O43248 304 aaPredicted RBP12.91□□□□□ -0.34
COL4A5-206ENST00000489230 RNF8O76064 485 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 DRD1P21728 446 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 CTHP32929 405 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 FLT3P36888 993 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 MAGEA9P43362 315 aa12.91□□□□□ -0.34
COL4A5-206ENST00000489230 GFPT1Q06210 699 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms