RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 MKI67P46013 3256 aaKnown RBP10.38□□□□□ -0.75
USP11-211ENST00000489111 H0YGN5 161 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 H3BNC9 293 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 PAGE1O75459 146 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 ZMYND10O75800 440 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 TBX18O95935 607 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 C1RP00736 705 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 HMBSP08397 361 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 HTR7P34969 479 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 ATP5C1P36542 298 aaKnown RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 PBX2P40425 430 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 CLCN4P51793 760 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 VCPP55072 806 aaKnown RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 EIF3EP60228 445 aaKnown RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 VSNL1P62760 191 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 OTUD4Q01804 1114 aaKnown RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 MTA1Q13330 715 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 BRD3Q15059 726 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 MAP9Q49MG5 647 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 PABPC1LQ4VXU2 614 aaKnown RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 SNX30Q5VWJ9 437 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 SLC9A4Q6AI14 798 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 WDR93Q6P2C0 686 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 DRICH1Q6PGQ1 229 aaPredicted RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 LILRA6Q6PI73 481 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 C1orf228Q6PIY5 440 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 RTL10Q7L3V2 364 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 NLRC5Q86WI3 1866 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 ATP6V0D2Q8N8Y2 350 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 ATL2Q8NHH9 583 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 PCDH19Q8TAB3 1148 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 HDAC7Q8WUI4 952 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 NKD2Q969F2 451 aaPredicted RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 HAPLN3Q96S86 360 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 TRIM51Q9BSJ1 452 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 PBX4Q9BYU1 374 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 SIK2Q9H0K1 926 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 LMAN2LQ9H0V9 348 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 OSBPL2Q9H1P3 480 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 SLC28A3Q9HAS3 691 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 EPB41L5Q9HCM4 733 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 TRPC7Q9HCX4 862 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 MAN1C1Q9NR34 630 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 ARHGEF4Q9NR80 690 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 CWC15Q9P013 229 aaKnown RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 OR12D3Q9UGF7 316 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 DMGDHQ9UI17 866 aaKnown RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 ZNF148Q9UQR1 794 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 HBS1LQ9Y450 684 aaKnown RBP10.37□□□□□ -0.75
USP11-211ENST00000489111 HEY1Q9Y5J3 304 aa10.37□□□□□ -0.75
USP11-211ENST00000489111 PATJQ8NI35 1801 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 H7C0C1 242 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 CCL16O15467 120 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 COCHO43405 550 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 XYLBO75191 536 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 FGF19O95750 216 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 PECAM1P16284 738 aaPredicted RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 IL4RP24394 825 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 CDC25CP30307 473 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 IRS1P35568 1242 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 ATP5OP48047 213 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 KCNJ1P48048 391 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 HCAR3P49019 387 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 NR2C2P49116 596 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 RING1Q06587 406 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 SEMA3BQ13214 749 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 EIF4EBP2Q13542 120 aaPredicted RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 CUL1Q13616 776 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 DPYSQ14117 519 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 NOMO1Q15155 1222 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 ACBD5Q5T8D3 534 aaPredicted RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 NUGGCQ68CJ6 796 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 RWDD4Q6NW29 188 aaKnown RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 KLHDC10Q6PID8 442 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 TMCO3Q6UWJ1 677 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 PDZD4Q76G19 769 aaPredicted RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 BZW1Q7L1Q6 419 aaKnown RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 CDKL3Q8IVW4 592 aaPredicted RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 ZNF276Q8N554 614 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 PQLC3Q8N755 202 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 PLD5Q8N7P1 536 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 CCDC89Q8N998 374 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 SLC35B2Q8TB61 432 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 CCHCR1Q8TD31 782 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 RSAD2Q8WXG1 361 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 IFT81Q8WYA0 676 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 ARNTL2Q8WYA1 636 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 ANKRD7Q92527 254 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 MRPS31Q92665 395 aaKnown RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 SLCO2A1Q92959 643 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 TBC1D31Q96DN5 1066 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 SLC39A13Q96H72 371 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 BTN2A3PQ96KV6 586 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 FCRL2Q96LA5 508 aaPredicted RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 ERP44Q9BS26 406 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 CERS4Q9HA82 394 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 ZNF334Q9HCZ1 680 aaPredicted RBP10.36□□□□□ -0.75
USP11-211ENST00000489111 ANLNQ9NQW6 1124 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 ASAH2Q9NR71 780 aa10.36□□□□□ -0.75
USP11-211ENST00000489111 SAE1Q9UBE0 346 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms