RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 HSPH1Q92598 858 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 SLC39A13Q96H72 371 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 RPGRIP1Q96KN7 1286 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 NCAPGQ9BPX3 1015 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 KXD1Q9BQD3 176 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 KIF9Q9HAQ2 790 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 KLHL11Q9NVR0 708 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAIP-209ENST00000488860 GPATCH2LQ9NWQ4 482 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 NR2E1Q9Y466 385 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 SNX10Q9Y5X0 201 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 ALG6Q9Y672 507 aa12.79□□□□□ -0.36
TRAIP-209ENST00000488860 SPTBN5Q9NRC6 3674 aaKnown RBP12.79□□□□□ -0.36
TRAIP-209ENST00000488860 COL4A3Q01955 1670 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 HEPACAM2A8MVW5 462 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 SLC2A3P11169 496 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 LAMP2P13473 410 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 FCARP24071 287 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 SLC25A11Q02978 314 aaKnown RBP12.78□□□□□ -0.36
TRAIP-209ENST00000488860 RING1Q06587 406 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 PPP2R5DQ14738 602 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 SMAD2Q15796 467 aaKnown RBP12.78□□□□□ -0.36
TRAIP-209ENST00000488860 PUS10Q3MIT2 529 aaKnown RBP12.78□□□□□ -0.36
TRAIP-209ENST00000488860 ARL13BQ3SXY8 428 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 EFHC2Q5JST6 749 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 KCNT1Q5JUK3 1230 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 TXNRD3NBQ6F5E7 133 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 MTSS1LQ765P7 747 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 SLFN11Q7Z7L1 901 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 UNC45BQ8IWX7 931 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 SLC35F6Q8N357 371 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 TRIM58Q8NG06 486 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 RIN3Q8TB24 985 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 RSPRY1Q96DX4 576 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 SNRNP25Q9BV90 132 aaKnown RBP12.78□□□□□ -0.36
TRAIP-209ENST00000488860 PHF7Q9BWX1 381 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-209ENST00000488860 ZFP14Q9HCL3 533 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 ARHGEF38Q9NXL2 777 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 SLC12A6Q9UHW9 1150 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 XPO7Q9UIA9 1087 aaKnown RBP12.78□□□□□ -0.36
TRAIP-209ENST00000488860 AMFRQ9UKV5 643 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 PACSIN2Q9UNF0 486 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-209ENST00000488860 AP4E1Q9UPM8 1137 aa12.78□□□□□ -0.36
TRAIP-209ENST00000488860 ZFP37Q9Y6Q3 630 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-209ENST00000488860 PAGE1O75459 146 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 KRT1P04264 644 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 IL1R2P27930 398 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 SLC11A2P49281 568 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 VCPP55072 806 aaKnown RBP12.77□□□□□ -0.37
TRAIP-209ENST00000488860 GNG11P61952 73 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 EIF4EBP2Q13542 120 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-209ENST00000488860 GRM2Q14416 872 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 KRT81Q14533 505 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 ODF2Q5BJF6 829 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 RAP1GAP2Q684P5 730 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 TANGO2Q6ICL3 276 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 PARM1Q6UWI2 310 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 NT5DC3Q86UY8 548 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 ZSCAN30Q86W11 494 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 CHSY1Q86X52 802 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 RHOT1Q8IXI2 618 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 BPIFB1Q8TDL5 484 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 BTN2A3PQ96KV6 586 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 DCLK3Q9C098 648 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 SIK2Q9H0K1 926 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 DHX35Q9H5Z1 703 aaKnown RBP12.77□□□□□ -0.37
TRAIP-209ENST00000488860 ANLNQ9NQW6 1124 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 KCND1Q9NSA2 647 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAIP-209ENST00000488860 EPS15L1Q9UBC2 864 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 AGO1Q9UL18 857 aaKnown RBP12.77□□□□□ -0.37
TRAIP-209ENST00000488860 FZD10Q9ULW2 581 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 WNT6Q9Y6F9 365 aa12.77□□□□□ -0.37
TRAIP-209ENST00000488860 GOLGA6L7A0A1B0GV03 622 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 E2F8A0AVK6 867 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 KCNU1A8MYU2 1149 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 I6L893 689 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-209ENST00000488860 TRDMT1O14717 391 aaKnown RBP12.76□□□□□ -0.37
TRAIP-209ENST00000488860 PSTPIP1O43586 416 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 ACSL4O60488 711 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 KLKB1P03952 638 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 KRT7P08729 469 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 WEE1P30291 646 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 ADRA1BP35368 520 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 IFNAR2P48551 515 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 MARCKSL1P49006 195 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 AAK1Q2M2I8 961 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 ERMARDQ5T6L9 678 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 PIK3R6Q5UE93 754 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 VITQ6UXI7 678 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 CYP4V2Q6ZWL3 525 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-209ENST00000488860 BBS7Q8IWZ6 715 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 YAF2Q8IY57 180 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 PYROXD2Q8N2H3 581 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 KRT35Q92764 455 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 FGF14Q92915 247 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 NTAN1Q96AB6 310 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 ELSPBP1Q96BH3 223 aa12.76□□□□□ -0.37
TRAIP-209ENST00000488860 C16orf45Q96MC5 204 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-209ENST00000488860 TRPV4Q9HBA0 871 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms