RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 SUFUQ9UMX1 484 aa13.1□□□□□ -0.31
CLIC4-202ENST00000488683 DOCK3Q8IZD9 2030 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 A6NJR5 290 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 FAM72CH0Y354 149 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 TRAFD1O14545 582 aaPredicted RBP13.09□□□□□ -0.31
CLIC4-202ENST00000488683 MDM4O15151 490 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 GSC2O15499 205 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 SNAI1O95863 264 aaPredicted RBP13.09□□□□□ -0.31
CLIC4-202ENST00000488683 ERVK-10P10266 1014 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 CALB2P22676 271 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 PRKCHP24723 683 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 GRM5P41594 1212 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 FAM72AQ5TYM5 149 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 SYPL2Q5VXT5 272 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 NCBP2-AS2Q69YL0 99 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 FAM72DQ6L9T8 149 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 FAM72BQ86X60 149 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 NUDCD3Q8IVD9 361 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 NME8Q8N427 588 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 ZNF398Q8TD17 642 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 STK32AQ8WU08 396 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 ZNF670Q9BS34 389 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 KATNBL1Q9H079 304 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 ANLNQ9NQW6 1124 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 UBP1Q9NZI7 540 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 KIAA1257Q9ULG3 409 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 PLLPQ9Y342 182 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 ZMPSTE24O75844 475 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 WFS1O76024 890 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 SNRPAP09012 282 aaKnown RBP13.09□□□□□ -0.31
CLIC4-202ENST00000488683 ESRRAP11474 423 aaPredicted RBP13.09□□□□□ -0.31
CLIC4-202ENST00000488683 ADIGQ0VDE8 80 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 ZNF792Q3KQV3 632 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 C4orf50Q6ZRC1 276 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 CMC1Q7Z7K0 106 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 DEFB106AQ8N104 65 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 KBTBD7Q8WVZ9 684 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 RILPQ96NA2 401 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 C11orf84Q9BUA3 381 aaPredicted RBP13.09□□□□□ -0.31
CLIC4-202ENST00000488683 RHOBTB2Q9BYZ6 727 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 TRIM6Q9C030 488 aaPredicted RBP13.09□□□□□ -0.31
CLIC4-202ENST00000488683 UNKQ9C0B0 810 aaKnown RBP13.09□□□□□ -0.31
CLIC4-202ENST00000488683 PACSIN3Q9UKS6 424 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 RALGAPA2Q2PPJ7 1873 aa13.09□□□□□ -0.31
CLIC4-202ENST00000488683 SPAG6O75602 509 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 PSMB4P28070 264 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 MAGEA3P43357 314 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 MAGEA6P43360 314 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 VPS52Q8N1B4 723 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 ARRDC4Q8NCT1 418 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 E2F7Q96AV8 911 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 NSL1Q96IY1 281 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 ZFP42Q96MM3 310 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 CAB39LQ9H9S4 337 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.08□□□□□ -0.32
CLIC4-202ENST00000488683 LNPEPQ9UIQ6 1025 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 SHROOM3Q8TF72 1996 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 PRR5-ARHGAP8B1AHC4 643 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 B2RBV5 119 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 ARRB2P32121 409 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 ARHGAP8P85298 464 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 THOC5Q13769 683 aaKnown RBP13.08□□□□□ -0.32
CLIC4-202ENST00000488683 DPYSL2Q16555 572 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 TNS4Q8IZW8 715 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 PNPLA1Q8N8W4 532 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 COLGALT1Q8NBJ5 622 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 UCMAQ8WVF2 138 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 DNAJB3Q8WWF6 145 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 MCUR1Q96AQ8 359 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 SNX27Q96L92 541 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 ZNF778Q96MU6 729 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 FAM161BQ96MY7 647 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 BTBD10Q9BSF8 475 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 TLE6Q9H808 572 aa13.08□□□□□ -0.32
CLIC4-202ENST00000488683 PIN4Q9Y237 131 aaKnown RBP13.08□□□□□ -0.32
CLIC4-202ENST00000488683 TPP1O14773 563 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 USP1O94782 785 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 SULT1E1P49888 294 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 CBLBQ13191 982 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 DLG2Q15700 870 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 ZBTB6Q15916 424 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 SPDYAQ5MJ70 313 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 HEATR6Q6AI08 1181 aaKnown RBP13.07□□□□□ -0.32
CLIC4-202ENST00000488683 RPAINQ86UA6 219 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 ACVR1CQ8NER5 493 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 NAF1Q96HR8 494 aaKnown RBP13.07□□□□□ -0.32
CLIC4-202ENST00000488683 SAR1AQ9NR31 198 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 SYBUQ9NX95 663 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 I6L893 689 aaPredicted RBP13.07□□□□□ -0.32
CLIC4-202ENST00000488683 DYNC1LI2O43237 492 aaPredicted RBP13.07□□□□□ -0.32
CLIC4-202ENST00000488683 KRT37O76014 449 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 ALDOAP04075 364 aaKnown RBP13.07□□□□□ -0.32
CLIC4-202ENST00000488683 SAT1P21673 171 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 GNL1P36915 607 aaPredicted RBP13.07□□□□□ -0.32
CLIC4-202ENST00000488683 PEX19P40855 299 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 STILQ15468 1287 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 C9orf57Q5W0N0 161 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 OSTM1Q86WC4 334 aa13.07□□□□□ -0.32
CLIC4-202ENST00000488683 EBNA1BP2Q99848 306 aaKnown RBP13.07□□□□□ -0.32
CLIC4-202ENST00000488683 ZNF180Q9UJW8 692 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms