RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 ZBED6P86452 979 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 MTA1Q13330 715 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 C2CD6Q53TS8 623 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 Q6ZS52 159 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 SND1Q7KZF4 910 aaKnown RBP eCLIP15.65■□□□□ 0.1
CXCL12-207ENST00000488591 PHF13Q86YI8 300 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-207ENST00000488591 ATP6V0D2Q8N8Y2 350 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 CPLX3Q8WVH0 158 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 ATOH1Q92858 354 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-207ENST00000488591 TMA16Q96EY4 203 aaKnown RBP15.65■□□□□ 0.1
CXCL12-207ENST00000488591 SLC39A13Q96H72 371 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 C11orf70Q9BRQ4 267 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 HAUS4Q9H6D7 363 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 PLK2Q9NYY3 685 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 COX16Q9P0S2 106 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 CAPN11Q9UMQ6 739 aa15.65■□□□□ 0.1
CXCL12-207ENST00000488591 LUC7L2Q9Y383 392 aaKnown RBP15.65■□□□□ 0.1
CXCL12-207ENST00000488591 BZW2Q9Y6E2 419 aaKnown RBP15.65■□□□□ 0.1
CXCL12-207ENST00000488591 TYW5A2RUC4 315 aaKnown RBP15.64■□□□□ 0.09
CXCL12-207ENST00000488591 K7EQS6 105 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 M0QYT0 321 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 TSPAN3O60637 253 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 MOCS2O96007 188 aaPredicted RBP15.64■□□□□ 0.09
CXCL12-207ENST00000488591 PENKP01210 267 aaPredicted RBP15.64■□□□□ 0.09
CXCL12-207ENST00000488591 IGLV3-25P01717 112 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 PRKCIP41743 596 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 SEC13P55735 322 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 CSTF1Q05048 431 aaKnown RBP15.64■□□□□ 0.09
CXCL12-207ENST00000488591 NME3Q13232 169 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 GAS6Q14393 721 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 ZNF528Q3MIS6 628 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 ZC3H12AQ5D1E8 599 aaKnown RBP15.64■□□□□ 0.09
CXCL12-207ENST00000488591 FYB2Q5VWT5 728 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 ARCQ7LC44 396 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 RPLP0P6Q8NHW5 317 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 SYN2Q92777 582 aaPredicted RBP15.64■□□□□ 0.09
CXCL12-207ENST00000488591 ACDQ96AP0 544 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 BTN2A3PQ96KV6 586 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 PAXBP1Q9Y5B6 917 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 ITIH6Q6UXX5 1313 aa15.64■□□□□ 0.09
CXCL12-207ENST00000488591 CHURC1-FNTBB4DL54 471 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 TPM1P09493 284 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 SP9P0CG40 484 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 SULT1E1P49888 294 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 NRLP54845 237 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 PITX1P78337 314 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-207ENST00000488591 MRPS21P82921 87 aaKnown RBP15.63■□□□□ 0.09
CXCL12-207ENST00000488591 TRIM14Q14142 442 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 SLC25A52Q3SY17 297 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 C2orf27AQ580R0 203 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 SPECC1LQ69YQ0 1117 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 ACAD10Q6JQN1 1059 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 VPS36Q86VN1 386 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 CCDC117Q8IWD4 279 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-207ENST00000488591 TERB1Q8NA31 727 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 KCNV2Q8TDN2 545 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 EZH1Q92800 747 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-207ENST00000488591 NPY6RQ99463 290 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 SELENOOQ9BVL4 669 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 FAM126AQ9BYI3 521 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-207ENST00000488591 SLC2A11Q9BYW1 496 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 PRMT8Q9NR22 394 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-207ENST00000488591 METTL5Q9NRN9 209 aaKnown RBP15.63■□□□□ 0.09
CXCL12-207ENST00000488591 TMEM59LQ9UK28 342 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 FBXO10Q9UK96 956 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 SLC8A2Q9UPR5 921 aa15.63■□□□□ 0.09
CXCL12-207ENST00000488591 GOLGA6L7A0A1B0GV03 622 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 KCNU1A8MYU2 1149 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 ABCB7O75027 752 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 CISD3P0C7P0 127 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 KRT3P12035 628 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 SATB1Q01826 763 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 NHLH1Q02575 133 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 DEUP1Q05D60 604 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 EIF4EBP2Q13542 120 aaPredicted RBP15.62■□□□□ 0.09
CXCL12-207ENST00000488591 E2F5Q15329 346 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 HSF5Q4G112 596 aaPredicted RBP15.62■□□□□ 0.09
CXCL12-207ENST00000488591 TDRD12Q587J7 1177 aaKnown RBP15.62■□□□□ 0.09
CXCL12-207ENST00000488591 FAM133BQ5BKY9 247 aaKnown RBP15.62■□□□□ 0.09
CXCL12-207ENST00000488591 C10orf76Q5T2E6 689 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 MPP7Q5T2T1 576 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 PIK3R6Q5UE93 754 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 ZC3H14Q6PJT7 736 aaKnown RBP15.62■□□□□ 0.09
CXCL12-207ENST00000488591 ZNF571Q7Z3V5 609 aaPredicted RBP15.62■□□□□ 0.09
CXCL12-207ENST00000488591 PHLDB2Q86SQ0 1253 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 MAML2Q8IZL2 1156 aaPredicted RBP15.62■□□□□ 0.09
CXCL12-207ENST00000488591 PHTF2Q8N3S3 785 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 ZNF557Q8N988 423 aaPredicted RBP15.62■□□□□ 0.09
CXCL12-207ENST00000488591 USP33Q8TEY7 942 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 NT5C3BQ969T7 300 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 VCPIP1Q96JH7 1222 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 ANP32EQ9BTT0 268 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 WDCPQ9H6R7 721 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 MUC6Q6W4X9 2439 aa15.62■□□□□ 0.09
CXCL12-207ENST00000488591 KIAA1549LQ6ZVL6 1849 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 ANKRD62A6NC57 917 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 TRIM24O15164 1050 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 TBL1XO60907 577 aa15.61■□□□□ 0.09
CXCL12-207ENST00000488591 PAPSS2O95340 614 aaPredicted RBP15.61■□□□□ 0.09
CXCL12-207ENST00000488591 GYPCP04921 128 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms