RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 C19orf67A6NJJ6 358 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 L1CAMP32004 1257 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 CA8P35219 290 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 ATXN1P54253 815 aaKnown RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 MMRN1Q13201 1228 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 OASLQ15646 514 aaKnown RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 CA9Q16790 459 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 BSPRYQ5W0U4 402 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 DDX53Q86TM3 631 aaKnown RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 FAM131BQ86XD5 332 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 MREGQ8N565 214 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 CCDC185Q8N715 623 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 CCDC89Q8N998 374 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 SLC7A14Q8TBB6 771 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 ACTL9Q8TC94 416 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 PIK3R5Q8WYR1 880 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 NTAN1Q96AB6 310 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 B3GALT6Q96L58 329 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 TRIM31Q9BZY9 425 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 FBXO44Q9H4M3 255 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 DHX35Q9H5Z1 703 aaKnown RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 GPATCH2LQ9NWQ4 482 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 MTRRQ9UBK8 725 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 NEU2Q9Y3R4 380 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 USP15Q9Y4E8 981 aaPredicted RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 BACE2Q9Y5Z0 518 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 MTMR11A4FU01 709 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 ZFXP17010 805 aaPredicted RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 TGM2P21980 687 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 IL4RP24394 825 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 RPL21P46778 160 aaKnown RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 DYNLT1P63172 113 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 PITX1P78337 314 aaPredicted RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 OTUD4Q01804 1114 aaKnown RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 SMAD4Q13485 552 aaKnown RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 ANKRD20A8PQ5CZ79 823 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 SLC9A4Q6AI14 798 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 PDE12Q6L8Q7 609 aaKnown RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 TMEM184AQ6ZMB5 413 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 NUP93Q8N1F7 819 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 C12orf76Q8N812 135 aaPredicted RBP13.19□□□□□ -0.3
NELFE-209ENST00000488426 SCAMP5Q8TAC9 235 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 FAM118BQ9BPY3 351 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 ABCC13Q9NSE7 274 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 PIGVQ9NUD9 493 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 FAM53CQ9NYF3 392 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 GRHL1Q9NZI5 618 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 WHRNQ9P202 907 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 ASIC3Q9UHC3 531 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 SCML2Q9UQR0 700 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 ZNF148Q9UQR1 794 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 SNX24Q9Y343 169 aa13.19□□□□□ -0.3
NELFE-209ENST00000488426 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.18□□□□□ -0.3
NELFE-209ENST00000488426 FAM86C2PA6NEL3 165 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 APOL1O14791 398 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 LILRB3O75022 631 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 FAM153BP0C7A2 387 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 CTSAP10619 480 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 EPCAMP16422 314 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 YWHAGP61981 247 aaKnown RBP eCLIP13.18□□□□□ -0.3
NELFE-209ENST00000488426 SCAPQ12770 1279 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 NME3Q13232 169 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 NOMO1Q15155 1222 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 PUS10Q3MIT2 529 aaKnown RBP13.18□□□□□ -0.3
NELFE-209ENST00000488426 FAM153CQ494X1 144 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 PPP6R3Q5H9R7 873 aaPredicted RBP13.18□□□□□ -0.3
NELFE-209ENST00000488426 EFHC2Q5JST6 749 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 SLC8B1Q6J4K2 584 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 ANKRD54Q6NXT1 300 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 GSTA5Q7RTV2 222 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 ADHFE1Q8IWW8 467 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 ARHGAP18Q8N392 663 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 ALLCQ8N6M5 410 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 HAUS1Q96CS2 278 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 SNF8Q96H20 258 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 SPATA17Q96L03 361 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 CEP295NLQ96MC4 621 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 PGLYRP2Q96PD5 576 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 FMO2Q99518 471 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 NEUROG2Q9H2A3 272 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 FAM204AQ9H8W3 233 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 WDR6Q9NNW5 1121 aaKnown RBP13.18□□□□□ -0.3
NELFE-209ENST00000488426 ZDHHC18Q9NUE0 388 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 COMMD8Q9NX08 183 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 DDIT4Q9NX09 232 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 IL37Q9NZH6 218 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 FAM153AQ9UHL3 310 aa13.18□□□□□ -0.3
NELFE-209ENST00000488426 C2CD2LO14523 706 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 MCF2LO15068 1137 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 RTN3O95197 1032 aaPredicted RBP13.17□□□□□ -0.3
NELFE-209ENST00000488426 SOD2P04179 222 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 ATF2P15336 505 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 ITIH2P19823 946 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 ARL4AP40617 200 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 CALCOCO2Q13137 446 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 PSMD5Q16401 504 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 ZDHHC24Q6UX98 284 aa13.17□□□□□ -0.3
NELFE-209ENST00000488426 RSPO2Q6UXX9 243 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms